Transcript Information: R_Transcript_228941.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89350158519602
Replicate 20.80755001601146
Replicate 30.88102836908279
Condition 2: 8 Hour
Replicate 10.34245964961182
Replicate 20.78184901542607
Replicate 30.44427019000947
Condition 3: 24 Hour
Replicate 10.56190437270604
Replicate 20.77116289827193
Replicate 30.30612174387269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_228941.p1 GENE.R_Transcript_228941~~R_Transcript_228941.p1 ORF type:5prime_partial len:286 (+),score=4.32,zf-RING_2|PF13639.2|7.3e-14,zf-RING_11|PF17123.1|5.9e-09,zf-rbx1|PF12678.3|2e-06,zf-C3HC4|PF00097.21|3.2e-06 R_Transcript_228941:3-860(+)
GATCTTCCGAAACCCCTTTCTGCTCTCTCTGTCTCGTATAATGTCAACTTTTCCAACATGAAAATCTTACTACTACTATCAATCCTCTTTCTATTTTTTTCTGATCAACATTTCTTTGTAATGGTAAGAGCTCAAGGCAAGGGCAAAAATAATAACCAAAACAAAAATCATGACCCCTTCTACACCGCCGTAACCATGATTGTCTTCGGTGTTATCTTCATCGTCTTCTATCTCCTTTTCTATTACTTCCTCAACAATTTCTTCCGAGCCACGTTCTTGGGCCGCGGGGCCAGGCCGGCCCAATCCCAGCCACGGACCCGCGGGCTGGACGAGGCCCTCATCCAGTCCTTCCCCACCTTCGCCTACGCCGAGGTGGAGGCTCACAACATGGACCCACCAATGGAGTGCGCCGTTTGTTTAAGCGCCTTTGAGGGTCATGAAACGCTGCGTTTGTTGCCCACGTGCGATCACGTGTTCCACCGTGGGTGCGTTGACCCTTGGCTTGAAGCTCACACCACGTGCCCCTTCTGTCGTGCCAGCCTTGTTCCACAACTCGGTGAGTTGACTCCGGAGGAGGAGGGGCCGAGTCAGGTGGACGAGTTGGTGGTGGAAGTCAACGGAGTGCAAGAAGACGTCGTGGGTGTGAGTGATCTTCAGGAGGGGGTGACCGTTGGCAAAGGAGGGATGATTTGGAGATGGAATTCAACAGGACACGTGGCACGAATTGATAGCGTAATGTGGTTAGAGAGTGGGGACAAGTTTACGCTAAGATTACCAGAGGAGGGTAGCAGAGATTTTGTGACAGGCAAGCTACGTAGGACTAGAAGTTGTGTATCACTATTTAACTATGGTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_228941.p1 GENE.R_Transcript_228941~~R_Transcript_228941.p1 ORF type:5prime_partial len:286 (+),score=4.32,zf-RING_2|PF13639.2|7.3e-14,zf-RING_11|PF17123.1|5.9e-09,zf-rbx1|PF12678.3|2e-06,zf-C3HC4|PF00097.21|3.2e-06 R_Transcript_228941:3-860(+)
DLPKPLSALSVSYNVNFSNMKILLLLSILFLFFSDQHFFVMVRAQGKGKNNNQNKNHDPFYTAVTMIVFGVIFIVFYLLFYYFLNNFFRATFLGRGARPAQSQPRTRGLDEALIQSFPTFAYAEVEAHNMDPPMECAVCLSAFEGHETLRLLPTCDHVFHRGCVDPWLEAHTTCPFCRASLVPQLGELTPEEEGPSQVDELVVEVNGVQEDVVGVSDLQEGVTVGKGGMIWRWNSTGHVARIDSVMWLESGDKFTLRLPEEGSRDFVTGKLRRTRSCVSLFNYGG*

Click here to download the sequence:
Link to NCBI Protein BLAST