Transcript Information: R_Transcript_229110.p1


Annotated TAIR IDAT4G20830.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11155486-11157577 | Forward length=570
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39113487760112
Replicate 20.14997357440213
Replicate 30
Condition 2: 8 Hour
Replicate 10.17489903533747
Replicate 20.31944116915979
Replicate 30.38896308472258
Condition 3: 24 Hour
Replicate 10
Replicate 20.15753756350412
Replicate 30.62536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229110.p1 GENE.R_Transcript_229110~~R_Transcript_229110.p1 ORF type:3prime_partial len:140 (+),score=17.88,FAD_binding_4|PF01565.19|3e-06 R_Transcript_229110:154-570(+)
ATGAAGGCAATAGTATTTTTAACCATATTGTCTTCCCTCCTCTACCTTTGGAAAGCATCTTCACAAACAACCACCACTAATAATAACAACTTCCTCGAATGCCTCAAAAACCAAACTAACCCACCTGCTGATATTTCTCACATTCTTTATACCCCTTCAAATCCTGCTTTTCCCTCAATCTTGAGAGCACGTATTCAAAATCTCAGGTTCACAGCTCCAAAAACATCAAAACCCAAATATCTCATCACTCCTACTAAAAAATCCCATATCTCAGCTGTTGTTAATTGCACCAAAAACTCAGGATTAAGGCTCATAGTTCGAAGTGGTGGGCATGATTTTGATGGATTATCTTACATTTCTGATGTCCCCTTTGTAATTTTAGATATGGTTAATTTCAGAACAATTCAAGTAGATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229110.p1 GENE.R_Transcript_229110~~R_Transcript_229110.p1 ORF type:3prime_partial len:140 (+),score=17.88,FAD_binding_4|PF01565.19|3e-06 R_Transcript_229110:154-570(+)
MKAIVFLTILSSLLYLWKASSQTTTTNNNNFLECLKNQTNPPADISHILYTPSNPAFPSILRARIQNLRFTAPKTSKPKYLITPTKKSHISAVVNCTKNSGLRLIVRSGGHDFDGLSYISDVPFVILDMVNFRTIQVDV

Click here to download the sequence:
Link to NCBI Protein BLAST