Transcript Information: R_Transcript_229316.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value2.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20
Replicate 30.76355791987175
Condition 2: 8 Hour
Replicate 10
Replicate 20.24845424267984
Replicate 30.60505368734623
Condition 3: 24 Hour
Replicate 10
Replicate 20.24505843211753
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229316.p1 GENE.R_Transcript_229316~~R_Transcript_229316.p1 ORF type:internal len:90 (+),score=18.31,AAA|PF00004.25|9.2e-25,AAA_16|PF13191.2|5.5e-05,AAA_16|PF13191.2|4e+02 R_Transcript_229316:3-269(+)
GTTATCTTGCCTGTGAAGTTTCCTCAGTTCTTCACTGGTAAGAGGCGACCATGGAGAGCATTTCTTTTTTATGGACCACCAGGAACAGGAAAGTCATATTTATCCAGGGCTGTTGCAAAAGAAGCAGATTCCACATTCTTTAGTGTATCCTGTTCAGCCTTGGTCTCTAAGTGGATGGGTGAAAGTGAAAAATTAGTCTCCAATCTTTTCCAAATGGCTCGTGAAAGTTCCCCTTCATTTATTTTTATTGATGAAATAGATTCATTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229316.p1 GENE.R_Transcript_229316~~R_Transcript_229316.p1 ORF type:internal len:90 (+),score=18.31,AAA|PF00004.25|9.2e-25,AAA_16|PF13191.2|5.5e-05,AAA_16|PF13191.2|4e+02 R_Transcript_229316:3-269(+)
VILPVKFPQFFTGKRRPWRAFLFYGPPGTGKSYLSRAVAKEADSTFFSVSCSALVSKWMGESEKLVSNLFQMARESSPSFIFIDEIDSL

Click here to download the sequence:
Link to NCBI Protein BLAST