Transcript Information: R_Transcript_22932.p1


Annotated TAIR IDAT5G52040.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ATRSP41, RS41, At-RS41
Annotation TypeOrtholog
Chromosome Positionchr5:21131081-21133318 | Forward length=357
E-Value1.5E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.355708859973
Replicate 215.856127285337
Replicate 321.671104447812
Condition 2: 8 Hour
Replicate 130.98833530668
Replicate 238.876387931356
Replicate 344.512870857463
Condition 3: 24 Hour
Replicate 130.197613656358
Replicate 225.441335981662
Replicate 328.790051393139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_22932.p1 GENE.R_Transcript_22932~~R_Transcript_22932.p1 ORF type:3prime_partial len:241 (+),score=44.02,RRM_1|PF00076.18|3e-13,RRM_1|PF00076.18|1.2e-15,RRM_6|PF14259.2|5.4e-10,RRM_6|PF14259.2|3.2e-11,RRM_5|PF13893.2|5.3e-05,RRM_5|PF13893.2|7.2e-08,RNA_bind|PF08675.7|0.34,RNA_bind|PF08675.7|2.5e-05,Nup35_RRM_2|PF14605.2|1.2e+02,Nup35_RRM_2|PF14605.2|2.3e-06 R_Transcript_22932:191-910(+)
ATGAGGCCAATCTTCTGTGGCAACTTTGAGTTTGATGCACGGTCAGGTGATCTGGAACGCCTTTTTAGACGATATGGCAAAGTTGATAGAGTGGATATGAAGTCTGGATTCGCATTCGTTTATATGGAGGATGAAAGGGATGCTGAATATGCAATTCGAGCACTTGATCGAACTGAATTTGGCAGAAAAGGACGGAGACTCCGTGTTGAATGGACAAAGCATGAGCGAGGTGGCAGGAAGTCGGTCAGTTCTAGAAGATCTGCTAATCTGAGGCCTTCTAAGACCTTATTTGTTATTAATTTCCCATATCATACGAAGACAAAGGACTTGGAAAGGCATTTTGATCCATATGGGAAAATCGTGAATGTGAGAATCAGAAGAAATTTTGCTTTTGTGCAGTATGAATCCCAGGAGGATGCAACTAAGGCACTCGATGCAACAAACATGAGCAAGATGTTGGATCGAGTAATATCTGTGGAATATGCTGCTCGAGAGGATGATGATCGAAGAGATGTCTATAGCCCGGATAGGAGAGTGCGTAATAGGTCACCTGACAGGAGACGGCGGTCACCAAGTCCGTATAGGAGAGAGAGAGGAAGTCCTGACTATGGAAATGGCTCTAGCCCTGCTGCTTATAGGAGAGAAAGAGGCAGCCCTGAGTATGGTCATGGTCGTGGCTCAAACCGTAGCCCTCGTAGAGCAGATAGGGGCAGCCCCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_22932.p1 GENE.R_Transcript_22932~~R_Transcript_22932.p1 ORF type:3prime_partial len:241 (+),score=44.02,RRM_1|PF00076.18|3e-13,RRM_1|PF00076.18|1.2e-15,RRM_6|PF14259.2|5.4e-10,RRM_6|PF14259.2|3.2e-11,RRM_5|PF13893.2|5.3e-05,RRM_5|PF13893.2|7.2e-08,RNA_bind|PF08675.7|0.34,RNA_bind|PF08675.7|2.5e-05,Nup35_RRM_2|PF14605.2|1.2e+02,Nup35_RRM_2|PF14605.2|2.3e-06 R_Transcript_22932:191-910(+)
MRPIFCGNFEFDARSGDLERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRALDRTEFGRKGRRLRVEWTKHERGGRKSVSSRRSANLRPSKTLFVINFPYHTKTKDLERHFDPYGKIVNVRIRRNFAFVQYESQEDATKALDATNMSKMLDRVISVEYAAREDDDRRDVYSPDRRVRNRSPDRRRRSPSPYRRERGSPDYGNGSSPAAYRRERGSPEYGHGRGSNRSPRRADRGSPE

Click here to download the sequence:
Link to NCBI Protein BLAST