Transcript Information: R_Transcript_229494.p1


Annotated TAIR IDAT1G11710.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3948886-3950859 | Forward length=657
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.29572254107462
Replicate 30
Condition 2: 8 Hour
Replicate 10.17243566864257
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.48502409635995
Replicate 20.15531872458153
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229494.p1 GENE.R_Transcript_229494~~R_Transcript_229494.p1 ORF type:5prime_partial len:142 (+),score=21.22,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|77,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.62,PPR|PF01535.16|83,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|2.1,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|2.1 R_Transcript_229494:3-428(+)
GCTGTTTATCAAGTTTTTGATCAAATGAAGAGCTGGGGTTATGCAATCTATCCTGACAGTCATTATTTAGTTATCCAAACATATTGTGTTGGTAGGGAGGTTGATAAGGCTTTGGTTAACTTGTATGGGATGATTGAAGCTGGGTATTTTCCGAAGATGGTAACAATCAATCGGATCATTCGAGGGCTCTGTGAAGAGGGCAACATCAGTGAAGCATTATCTGTTTTGGTTCTTGTGAGTGAATCAAGTAAAATTCCCAGCAAAATTAGCTATAACATTTTGATTGACGAGTTCAATAGACAAAAGGATCTGCTTGCTGCTTCTAGTGTCTATGGCGCAGCATTAAAACTAGGTGTATGGCCTCATAAGAAACCAATGTCTGTTCCCATAAAAAAAAAAAAAGAAAAAAGAAACCAATGTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229494.p1 GENE.R_Transcript_229494~~R_Transcript_229494.p1 ORF type:5prime_partial len:142 (+),score=21.22,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|77,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.62,PPR|PF01535.16|83,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|2.1,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|2.1 R_Transcript_229494:3-428(+)
AVYQVFDQMKSWGYAIYPDSHYLVIQTYCVGREVDKALVNLYGMIEAGYFPKMVTINRIIRGLCEEGNISEALSVLVLVSESSKIPSKISYNILIDEFNRQKDLLAASSVYGAALKLGVWPHKKPMSVPIKKKKEKRNQCL*

Click here to download the sequence:
Link to NCBI Protein BLAST