Transcript Information: R_Transcript_229495.p1


Annotated TAIR IDAT3G53700.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)MEE40
Annotation TypeHomolog
Chromosome Positionchr3:19900303-19902567 | Forward length=754
E-Value1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34833894951753
Replicate 20.56096985845071
Replicate 30.65572722126391
Condition 2: 8 Hour
Replicate 10.51401624889255
Replicate 20.72544845667969
Replicate 31.0045738702123
Condition 3: 24 Hour
Replicate 10.65718913819764
Replicate 20.1683607548899
Replicate 30.71009728946041


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229495.p1 GENE.R_Transcript_229495~~R_Transcript_229495.p1 ORF type:complete len:524 (+),score=72.01,PPR_2|PF13041.2|8.7e+03,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|4.3e-15,PPR_2|PF13041.2|2.4e-17,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|1.1e-06,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|3e-09,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.071,PPR_1|PF12854.3|7.8e+03,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|11,PPR|PF01535.16|0.0093,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.00024,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.7,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|0.075,PPR|PF01535.16|13,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.00092,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.4e+03,MRP-S27|PF10037.5|16,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|1.9,MRP-S27|PF10037.5|1.2e+02 R_Transcript_229495:385-1956(+)
ATGCCTTTTTCTCTAGGAGCCTTCTCATGGCCTACTCATGCTTCCCTCTTCACCAACACTTACACACCTTCAAATCCCTCCATTACCCATAAATTTCCACCATCAAAATTTGCCAACCTTTCAACAATAACATATAATACTAACTTATACCAACTTAAAATATCCTTCAATTTAACTCATACCCATTCCAACCTCACCAGAACTCAAAGTACTACCTTATCCTTCCAAGAAAAAGAGACTGAAACAATAGTTGAACACTTTGCTGAAAAAATCAGCAAAAGCCCAGTTCAAGAGAGGCCTAAATTCCTTACAAGTATCATTGAGAATCATGCTGGGTCCAAAACCATAGCTTATTTCAATGATTTGATTATGGGTTTGATGAGAGCTGAGGAATTTCACCTTGCCTTGAAGGTGTTCGACGAAATGCCTCTGTATGGAGTTTCACCTGATAGGTGGACATACTCTATGCTAATCAGTTGCTATTGCAAGCAAAAAGAACCCCATGAAGGAAAAAGGCTCCTAGACCTTATGATTGAACATGGGTTTCGACCGAATATCGTTACACTTACCATTCTGGTCAATGCATTTTGCTCTAGGGGCAAAGTTCAGAGAGCTTTGGAGGTTTTAGAGCTAATGGATAGATTTGGGTGTAAGCCAAATATACGAACTTATAATTGTTTGTTGAAAGGGTTGTGCTTTGTTGGGAGAGTTGAAGAAGCATATGACATGTTGATGACCTTGAAAAGAAAGGATAGTACCAGTAGTAATTGTATTAGCCCTGATCTGTATTCATACACTGCTGTTATGGATGGTTTGTGTAAAGTGGGAAGATCAGATGAGGCAATGGAATTGCTCGATGAAGCAATTGGGATCGGATTAACGCCGAATGTGATCACTTACAATACTCTTTTCCAAGGATATTGCAAAGAGGGGCATCCAAGAAAAGGAATTAAGTTGTTGAAACTGATGAAGGAAAGAGGTTGTGAGCCTGATTATGTTAGTTATAGCACTTTGCTACATGGGTTATTGAAGTGGCGAAAAATTATGGCAGCATTTTGGATTTACAAGGAAATGGTAAAGATTGGTCTTAAGGTGGATGAAAGGATGCTGAACACTTTGTTGAGGGGTTTGTGTAGGAAATCTTGGAAAGAGGAAGGGTTGTTTGAAGCTGTTTATCAAGTTTTTGATCAAATGAAGAGCTGGGGTTATGCAATCTATCCTGACAGTCATTATTTAGTTATCCAAACATATTGTGTTGGTAGGGAGGTTGATAAGGCTTTGGTTAACTTGTATGGGATGATTGAAGCTGGGTATTTTCCGAAGATGGTAACAATCAATCGGATCATTCGAGGGCTCTGTGAAGAGGGCAACATCAGTGAAGCATTATCTGTTTTGGTTCTTGTGAGTGAATCAAGTAAAATTCCCAGCAAAATTAGCTATAACATTTTGATTGACGAGTTCAATAGACAAAAGGATCTGCTTGCTGCTTCTAGTGTCTATGGCGCAGCATTAAAACTAGGTGTATGGCCTCATAAGAAACCAATGTCTGTAACAATAAGTAAAGACTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229495.p1 GENE.R_Transcript_229495~~R_Transcript_229495.p1 ORF type:complete len:524 (+),score=72.01,PPR_2|PF13041.2|8.7e+03,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|4.3e-15,PPR_2|PF13041.2|2.4e-17,PPR_2|PF13041.2|1.5e-09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|1.1e-06,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|3e-09,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.071,PPR_1|PF12854.3|7.8e+03,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|11,PPR|PF01535.16|0.0093,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.00024,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|0.00022,PPR|PF01535.16|2.7,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|0.075,PPR|PF01535.16|13,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.00092,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.4e+03,MRP-S27|PF10037.5|16,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|1.9,MRP-S27|PF10037.5|1.2e+02 R_Transcript_229495:385-1956(+)
MPFSLGAFSWPTHASLFTNTYTPSNPSITHKFPPSKFANLSTITYNTNLYQLKISFNLTHTHSNLTRTQSTTLSFQEKETETIVEHFAEKISKSPVQERPKFLTSIIENHAGSKTIAYFNDLIMGLMRAEEFHLALKVFDEMPLYGVSPDRWTYSMLISCYCKQKEPHEGKRLLDLMIEHGFRPNIVTLTILVNAFCSRGKVQRALEVLELMDRFGCKPNIRTYNCLLKGLCFVGRVEEAYDMLMTLKRKDSTSSNCISPDLYSYTAVMDGLCKVGRSDEAMELLDEAIGIGLTPNVITYNTLFQGYCKEGHPRKGIKLLKLMKERGCEPDYVSYSTLLHGLLKWRKIMAAFWIYKEMVKIGLKVDERMLNTLLRGLCRKSWKEEGLFEAVYQVFDQMKSWGYAIYPDSHYLVIQTYCVGREVDKALVNLYGMIEAGYFPKMVTINRIIRGLCEEGNISEALSVLVLVSESSKIPSKISYNILIDEFNRQKDLLAASSVYGAALKLGVWPHKKPMSVTISKDL*

Click here to download the sequence:
Link to NCBI Protein BLAST