Transcript Information: R_Transcript_229626.p2


Annotated TAIR IDAT3G04240.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SEC
Annotation TypeOrtholog
Chromosome Positionchr3:1114187-1120722 | Reverse length=977
E-Value2.3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79360699803125
Replicate 20.22822065669889
Replicate 30.24898627821905
Condition 2: 8 Hour
Replicate 10.79845211784495
Replicate 22.6735836984026
Replicate 31.5784009235119
Condition 3: 24 Hour
Replicate 10.74862414872948
Replicate 20.95892429959032
Replicate 31.9032786684259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229626.p2 GENE.R_Transcript_229626~~R_Transcript_229626.p2 ORF type:internal len:92 (-),score=12.16,TPR_11|PF13414.2|1.6e-05,TPR_11|PF13414.2|1e-14,TPR_11|PF13414.2|5e-06,TPR_1|PF00515.24|4.1e+02,TPR_1|PF00515.24|1.4e-08,TPR_1|PF00515.24|3.2e-10,TPR_2|PF07719.13|1.6e+03,TPR_2|PF07719.13|7.5e-07,TPR_2|PF07719.13|6.4e-07,TPR_8|PF13181.2|5.2e-05,TPR_8|PF13181.2|3.9e-07,TPR_17|PF13431.2|0.032,TPR_17|PF13431.2|5.8e-06,TPR_17|PF13431.2|0.99,TPR_12|PF13424.2|1.4e-13,TPR_7|PF13176.2|0.00016,TPR_7|PF13176.2|6.4e-06,TPR_14|PF13428.2|0.021,TPR_14|PF13428.2|0.00011,TPR_9|PF13371.2|0.4,TPR_9|PF13371.2|2.9e-05,TPR_10|PF13374.2|0.22,TPR_10|PF13374.2|0.0053,TPR_16|PF13432.2|75,TPR_16|PF13432.2|4.4e-06,TPR_16|PF13432.2|1.1e+03,TPR_19|PF14559.2|5.7e-06,TPR_6|PF13174.2|18,TPR_6|PF13174.2|0.0018,NARP1|PF12569.4|8.1e-06 R_Transcript_229626:2-274(-)
TATGTCGAAGCTCTTCGTGTCCAGCCAAATCTTTCGATTGCTTGGTCCAATCTTGCCGGTCTTTTCATGGAGACAGGAGATTATAACAATGCTCTTCATTGTTACAAGGAAGCGATCAAACACAAACCTACATGCACAGATGCCTACCTTAACTTGGGAAATGTTTACAAGGCTTTGGGAATGACTCATGAAGCTGTCCTGTGTTATCAACGTGCCTTGCAAGTCTGTCCAGACTATGCTATAGCTGATGCTAGTGTGGCTAGTGTATACTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229626.p2 GENE.R_Transcript_229626~~R_Transcript_229626.p2 ORF type:internal len:92 (-),score=12.16,TPR_11|PF13414.2|1.6e-05,TPR_11|PF13414.2|1e-14,TPR_11|PF13414.2|5e-06,TPR_1|PF00515.24|4.1e+02,TPR_1|PF00515.24|1.4e-08,TPR_1|PF00515.24|3.2e-10,TPR_2|PF07719.13|1.6e+03,TPR_2|PF07719.13|7.5e-07,TPR_2|PF07719.13|6.4e-07,TPR_8|PF13181.2|5.2e-05,TPR_8|PF13181.2|3.9e-07,TPR_17|PF13431.2|0.032,TPR_17|PF13431.2|5.8e-06,TPR_17|PF13431.2|0.99,TPR_12|PF13424.2|1.4e-13,TPR_7|PF13176.2|0.00016,TPR_7|PF13176.2|6.4e-06,TPR_14|PF13428.2|0.021,TPR_14|PF13428.2|0.00011,TPR_9|PF13371.2|0.4,TPR_9|PF13371.2|2.9e-05,TPR_10|PF13374.2|0.22,TPR_10|PF13374.2|0.0053,TPR_16|PF13432.2|75,TPR_16|PF13432.2|4.4e-06,TPR_16|PF13432.2|1.1e+03,TPR_19|PF14559.2|5.7e-06,TPR_6|PF13174.2|18,TPR_6|PF13174.2|0.0018,NARP1|PF12569.4|8.1e-06 R_Transcript_229626:2-274(-)
YVEALRVQPNLSIAWSNLAGLFMETGDYNNALHCYKEAIKHKPTCTDAYLNLGNVYKALGMTHEAVLCYQRALQVCPDYAIADASVASVYY

Click here to download the sequence:
Link to NCBI Protein BLAST