Transcript Information: R_Transcript_229629.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79360699803125
Replicate 21.8257652535911
Replicate 31.3279268171683
Condition 2: 8 Hour
Replicate 12.6615070594832
Replicate 21.4583183809469
Replicate 30.6576670514633
Condition 3: 24 Hour
Replicate 11.8299701413387
Replicate 20.79910358299193
Replicate 30.79303277851077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229629.p3 GENE.R_Transcript_229629~~R_Transcript_229629.p3 ORF type:complete len:138 (+),score=14.12,RVT_1|PF00078.23|3.3e-21 R_Transcript_229629:3465-3878(+)
ATGAAGACTATTGTTGATAATGTCCTGCTAGCACATGAATTAGCTCAACATTATGCTAGGTCCCACATCTTCCCCAGAATTATCATGAAGCTTGATATACAGAAGGCCTATGACACTGTCAGTTGGAAATTAGTTGAAGCCATCCTTTCAGACTTTGGATTCCTTACAAAGTTTAGCAAAAGAATTCTGATGTGTATAACCTCATCAAGATTTTCTATAATTATGAATGGTTGGAATAAGGGGTATTTTCAGGGTCATTGTGGTTTGAGACAAGGTGATCCCCTATCACCCTATCTCTTTGTTTTGTGCATGGAGGCCCTGTCTCGAATGCTGAGGAAGCTTAAATCAACACATGGCTTTTCCTATCATCCTAAGTATGGGAGAGTGGGGCTTATTGTAACGAAACAAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229629.p3 GENE.R_Transcript_229629~~R_Transcript_229629.p3 ORF type:complete len:138 (+),score=14.12,RVT_1|PF00078.23|3.3e-21 R_Transcript_229629:3465-3878(+)
MKTIVDNVLLAHELAQHYARSHIFPRIIMKLDIQKAYDTVSWKLVEAILSDFGFLTKFSKRILMCITSSRFSIIMNGWNKGYFQGHCGLRQGDPLSPYLFVLCMEALSRMLRKLKSTHGFSYHPKYGRVGLIVTKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST