Transcript Information: R_Transcript_229639.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27448061586043
Replicate 20.15786692042329
Replicate 30
Condition 2: 8 Hour
Replicate 10.18410424772365
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.17261509193763
Replicate 20.33165802842973
Replicate 30.49370762451648


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229639.p3 GENE.R_Transcript_229639~~R_Transcript_229639.p3 ORF type:complete len:133 (+),score=13.22,RVT_1|PF00078.23|5.4e-20 R_Transcript_229639:2355-2753(+)
ATGAGGTTTGTAATAGGCAAAGAACAAGCAACTTTTGTCAAAGGTAGAAACATGTTTGAGAATGTCCTTTTGGCCCATGAGCTGACACAGCACTATGGTGGAGGTAATACTTCCCCTAGATTATTCATGAAGATTGATATTAGAAAGGATTATGACACCTTGAGTTGGATTTTCATTCATGATATTCTCTGTTATTTTGCTTTCCCCAGAAAGTTTATTGCTTGGATTATGACTAGTATTACTACTACTAGATTTTCTATGAGTATAAATGGTAGTCCAAAGGGGTACTTTGAAGGTAAATGTGGATTGAGGCAAGGGGACCCTATATCACCCTATCTCTTTGTGCTTTGTATGGAGGGCTTCTCTAGGATGTTAAGAGGCATTAGGAATGTAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229639.p3 GENE.R_Transcript_229639~~R_Transcript_229639.p3 ORF type:complete len:133 (+),score=13.22,RVT_1|PF00078.23|5.4e-20 R_Transcript_229639:2355-2753(+)
MRFVIGKEQATFVKGRNMFENVLLAHELTQHYGGGNTSPRLFMKIDIRKDYDTLSWIFIHDILCYFAFPRKFIAWIMTSITTTRFSMSINGSPKGYFEGKCGLRQGDPISPYLFVLCMEGFSRMLRGIRNVK*

Click here to download the sequence:
Link to NCBI Protein BLAST