Transcript Information: R_Transcript_229645.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1960629685428
Replicate 20.35891111822732
Replicate 30.32630680336399
Condition 2: 8 Hour
Replicate 10.13952059799
Replicate 20.50964972857403
Replicate 30.5688538940862
Condition 3: 24 Hour
Replicate 10.98110287297881
Replicate 21.0682034220507
Replicate 31.1224463941999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229645.p1 GENE.R_Transcript_229645~~R_Transcript_229645.p1 ORF type:complete len:351 (+),score=36.62,RVT_1|PF00078.23|3.5e-37 R_Transcript_229645:1424-2476(+)
ATGAAGGAGTTTTTTCAGTCTGGCAGAATTTTGAAACAGCTTAATTTTACACTAATTTTGCTGATTCCTAAAGTTGAGGTACATCAAAAGGTGAGTGACTTTAGACCTGTAGCACTCTATAATGTCCTATATAAGGTCATCACAAAGATTATTGCAAATAGAATTCAGCATGTTATGGCCTATTTGGTGGGTAGGGAACAAGCTGCCTTTGTTAAAGGTAAACTGCTAGTTGAAAATGCTATGTTGGCTCATGAATTGACTCAGCACTATAATAGAACCTATATATCACCTAGAGTCATCATGAAACTAGATATACAAAAAGCATATGATATTGTAAGTTGCAAATTTGTTGAAACTACTTTGTCCATATTTGGAATTCCTGATGAGTTCATATCTTGGGTCATAGCTTGTATCGCCACTTTCAAGTCCTCTATGAATGTTAATGGATGGCATAGAGGGTATTTTGAGGGTAAATGTGGTTTAAGGCATGATGATCCCTTATCACCTTACCTTTTCATTGTGTGCATGGAGTCTTTATCTAGAATGTTCAGGGCATTAAAAGGAAAGAAGGGGTTCTCATACCAACCCAAATGTGTAAGATTGGGCAATACAAACTTAGCATTTTCAGATGATCCTCTTATCTTCACCAAAGGTGATGTCCCCTTAGTTCAGGTAGCTCTTCAATGTGTACAAGACTTTTCAAATATGTCAGGATTGCATATTAATCCACATAAATCTAATATCTACTTTGGGGGTATACATGAGAATATAAAGAGGCAAATCCTTAATGTTACTGGATATGTGGAGGGAACCTTTCCTGTTAAGTACTTAGGGTTACCCCTAAGTGCTGCTGATGTCAATGCAAAGATGTGCAGAGAATTGGTAGAAAAGATTAGAATGAAACTGTCTCATTGGGCGACACACTCCTTATCATATGCAGGGAGGATTGCACTAGTTATTACTGTTCTTTTTGGGTTGGAAAACTTCTGGTGCAATGTTTTTCTCATTCCTAAAGGTGTGAATAGTAATGAAATTGAAAGGATGTGCAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229645.p1 GENE.R_Transcript_229645~~R_Transcript_229645.p1 ORF type:complete len:351 (+),score=36.62,RVT_1|PF00078.23|3.5e-37 R_Transcript_229645:1424-2476(+)
MKEFFQSGRILKQLNFTLILLIPKVEVHQKVSDFRPVALYNVLYKVITKIIANRIQHVMAYLVGREQAAFVKGKLLVENAMLAHELTQHYNRTYISPRVIMKLDIQKAYDIVSCKFVETTLSIFGIPDEFISWVIACIATFKSSMNVNGWHRGYFEGKCGLRHDDPLSPYLFIVCMESLSRMFRALKGKKGFSYQPKCVRLGNTNLAFSDDPLIFTKGDVPLVQVALQCVQDFSNMSGLHINPHKSNIYFGGIHENIKRQILNVTGYVEGTFPVKYLGLPLSAADVNAKMCRELVEKIRMKLSHWATHSLSYAGRIALVITVLFGLENFWCNVFLIPKGVNSNEIERMCR*

Click here to download the sequence:
Link to NCBI Protein BLAST