Transcript Information: R_Transcript_229840.p1


Annotated TAIR IDAT5G39130.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15665638-15666413 | Reverse length=222
E-Value8.7E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7419838255541
Replicate 20.9583373633995
Replicate 30.57029222231085
Condition 2: 8 Hour
Replicate 10.71120769556314
Replicate 21.3917561311941
Replicate 31.280404068658
Condition 3: 24 Hour
Replicate 10.19052122180667
Replicate 20.27454679116901
Replicate 30.72656281118331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229840.p1 GENE.R_Transcript_229840~~R_Transcript_229840.p1 ORF type:5prime_partial len:241 (+),score=25.01,Cupin_1|PF00190.18|2e-45,Cupin_2|PF07883.7|3.4e-07 R_Transcript_229840:2-724(+)
TTGTATACGTTATTCAAAAAAAAAAAAAAAAAAAAGGACTCGTATCAAAATATGTTCATATATGTTGCCCTCATGGCTATGACTAGTTATGTAGTCTATGCCACTGATCCCACTCAGCTGCAAGATTTTTGTGTTGGGGTCAACGAGCCGGCTGCTGGATTATTTGTGAATGGGCTATTCTGTAAGAACCCAATGGATGTAAATCCAAACGATTTCCTATTCAGAGGGCTAGACATGCCGGGAGACACAAACAACAAGCAAGGGTTCAGCGTCAAATTAGTGAGCGCAGACAACTTAGGGGGACTCAACACACTTGGAATCTCACTGGCACGGCTAGACTTTGCACCACACGGCCTAAACCCTCCACACACGCACCCCCGTGCCACTGAGATCTTCAATGTCTTAGAGGGTCAGTTCTATGTGGGTTTTGTCACCTCAAACCAAGTAAATGGTCCAAACAAGCTTTTTGCAAAAGTCCTAAACAAAGGTGATGTGTTTGTTTTCCCTCAAGGCCTTATACACTTTCAGCTCAATATTGGTAACTTCCCTGGTGTGGGGATTTCTGGATTGAGTAGCCAGAACCCTGGTGTCATCACCATCGCTGATGCCGTGTTTGGCTCTGATCCTCCTATCTCCATTGATGTTCTTGCAAAGGCCTTCCAGGTGGATGAGAATTTGGTCAAATATCTTCAGTCTCAGTTCGGATCTGGGCCCCACTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229840.p1 GENE.R_Transcript_229840~~R_Transcript_229840.p1 ORF type:5prime_partial len:241 (+),score=25.01,Cupin_1|PF00190.18|2e-45,Cupin_2|PF07883.7|3.4e-07 R_Transcript_229840:2-724(+)
LYTLFKKKKKKKDSYQNMFIYVALMAMTSYVVYATDPTQLQDFCVGVNEPAAGLFVNGLFCKNPMDVNPNDFLFRGLDMPGDTNNKQGFSVKLVSADNLGGLNTLGISLARLDFAPHGLNPPHTHPRATEIFNVLEGQFYVGFVTSNQVNGPNKLFAKVLNKGDVFVFPQGLIHFQLNIGNFPGVGISGLSSQNPGVITIADAVFGSDPPISIDVLAKAFQVDENLVKYLQSQFGSGPHY*

Click here to download the sequence:
Link to NCBI Protein BLAST