Transcript Information: R_Transcript_229891.p1


Annotated TAIR IDAT5G02640.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:594334-594819 | Reverse length=161
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39897182414686
Replicate 20.68840329233764
Replicate 31.2517342948717
Condition 2: 8 Hour
Replicate 10.40140762208599
Replicate 20.48876244461608
Replicate 30.49594564536576
Condition 3: 24 Hour
Replicate 10.75271499107227
Replicate 20.72312324231401
Replicate 30.95683954915398


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229891.p1 GENE.R_Transcript_229891~~R_Transcript_229891.p1 ORF type:5prime_partial len:183 (+),score=32.54 R_Transcript_229891:3-551(+)
AGTAGTTATCAAAACCATCCCAATTCCCAGTATAAATTTCGTTATCATGAAGTGAAATATAGGAAACCATATCAAAGCAACAAGGGGGAAAAGAAAAAAACAAGTTTAGAGATGAGTGCAGTTTGTATACAGAGCTGCTTATCAGACATTGAGGAGCCTGTAAGGTTAAACCTTGTGAAACTGTACCAATGGCCTCATTCTGAGGCTGAATTTCTGAAGGAAGTAACTAGAAGATCAGAAAGAGGAATTAGTGGTTCCATTTCAAAATCGCGGTACCAGGAGAGCTTTGCTTGCAGGCAGAGATATCTTAGGAGCTACAATTTTACCAAGAAGAAAGAGAGCCCTGCCCAAAAGACAAAGAAATGGTTTAGGCTCCATTTTTCAAGTAACAAGAGGATTGACATCCATGGAAATAAACCCTCTGAAGAAAAAGAACAAGTTAAGAAGAGGATAGATCAAGGGAGTTCATGTGGTGATATTGTTGATATTATGGTCAAGTTTTTACTTTCTTGTGTTGCTAAAGTTGATGTTTATGAGGACCTGCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229891.p1 GENE.R_Transcript_229891~~R_Transcript_229891.p1 ORF type:5prime_partial len:183 (+),score=32.54 R_Transcript_229891:3-551(+)
SSYQNHPNSQYKFRYHEVKYRKPYQSNKGEKKKTSLEMSAVCIQSCLSDIEEPVRLNLVKLYQWPHSEAEFLKEVTRRSERGISGSISKSRYQESFACRQRYLRSYNFTKKKESPAQKTKKWFRLHFSSNKRIDIHGNKPSEEKEQVKKRIDQGSSCGDIVDIMVKFLLSCVAKVDVYEDLH*

Click here to download the sequence:
Link to NCBI Protein BLAST