Transcript Information: R_Transcript_229932.p1


Annotated TAIR IDAT3G49740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18447788-18450001 | Forward length=737
E-Value5.8E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0859885236217
Replicate 20.3363251782931
Replicate 30.15725449150677
Condition 2: 8 Hour
Replicate 10.39222209297647
Replicate 20.76753598997204
Replicate 30.62305299612312
Condition 3: 24 Hour
Replicate 10.89309547567728
Replicate 21.2112727994825
Replicate 31.1018981764571


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229932.p1 GENE.R_Transcript_229932~~R_Transcript_229932.p1 ORF type:complete len:437 (+),score=74.44,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|6.4e-13,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|4.3,PPR_2|PF13041.2|3.8e-10,PPR_2|PF13041.2|0.00067,PPR_2|PF13041.2|13,PPR_2|PF13041.2|11,PPR|PF01535.16|0.2,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.2,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|0.59,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|1.2,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.0068,PPR_3|PF13812.2|49,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|42,PPR_3|PF13812.2|7.7e+03,PPR_3|PF13812.2|2.8,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.86,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.4e+03 R_Transcript_229932:862-2172(+)
ATGAGCTCAGGTTCAGCTGTCGAAGTGTGCGATCAGTTATATGCCCGGGTTATTAAGATGGGTTATGAAACTTGTACATTGGTGAACAACGCTGCTATGGCCATGTATGCTGATCATGGGAAGCTGGACGCAGTGAAGAAGCTTTTTGACAAATTGGAGGAGAAGGATGTTGTCTCATGGAACACTGTGATAGCTGCATATGCTCAAAATGATCACACTAGATTGGCAACCTTGGTTTATATGGAGATGCAGAGGAGAGGTATAGTTCCAGATGAGTACACAATGAGCACACTTTTAGCTAGCTCTGAAAGCTTAGAAGTTGTTCAGATGTTCTACGCATTTGTACTTAAAAATGGGCTCAGTCTGATGAGCGAAGTCGTGAATGCTTTGGTCTCTGCATTCTCTAAGCAAGGTAACATTGACCATGCCTATCAAATATTCTGTGGCAAGCACTCAAAAAATTTGATTACATGGAATGCAATTATTTCTGGGTTCTTGTTAAACCAACGTCCTTTGCAGGCCCTAGAACTATTTCTTTTGATGCAGAAGTTGCAAATCTGGCCTGATGTCTATACTTTAACTATGGTATTGAGCATTTGTGCCAGCATTTCATCCCTGAGACATGGAAGGGAGGTCCATGGCTACATTTTTACACATGGGCTTACAGGCGAAACATCCTTAGGAAATGGCCTGATCACAATGTATGCAAAATGTGGGATTTTAAATTGTGCTGCTAAGGCATTCAATTATATGATTGAAAGGGATGTTGTGAGTTGGAATGCCATTATTTCTGCATTTGCACAATATGGAGAAGGAAGCAAAGCTGTCGAATACTTCACAGAAATGCAGTTTGAGATTGGCATCAGACAAGATCAGGCCACATTTACTGCTGTCCTATCTGCTTGCAGTCATGCTGGTTTAGTGTGTGAAGGCATCCGCATCTTCAACTTCATGGTGAATGATTATGGCTTCAAGCCAGGAGTAGATCACTTTTCTTGCCTTATTGACCTTTTAGGACGAGCTGGATACCTTGATGAAACAGAAGAACTAATTGATAGTAAGAATTCAAAGGTTGATCCCAATGTTTGGTGGACCTTGTTTAGCGCTTGTGCAGCCTATGGAAATGTAAGGCTGGGAAGAATTGTTGCGGGTTTGCTTCTCCAGACTCAGAAAAATGACCCATCTGTTTATGTGATGCTATCAAATATTCATGCAAATGCCGGACAATGGGAAGACGCCGCTAACATTAGGGACATGATGAAGAGAGTTGGAGTTGCAAAACAACCAGGCTACAGTTGGATCAAGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229932.p1 GENE.R_Transcript_229932~~R_Transcript_229932.p1 ORF type:complete len:437 (+),score=74.44,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|6.4e-13,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|4.3,PPR_2|PF13041.2|3.8e-10,PPR_2|PF13041.2|0.00067,PPR_2|PF13041.2|13,PPR_2|PF13041.2|11,PPR|PF01535.16|0.2,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.2,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|0.59,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|1.2,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.0068,PPR_3|PF13812.2|49,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|42,PPR_3|PF13812.2|7.7e+03,PPR_3|PF13812.2|2.8,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.86,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|2.4e+03 R_Transcript_229932:862-2172(+)
MSSGSAVEVCDQLYARVIKMGYETCTLVNNAAMAMYADHGKLDAVKKLFDKLEEKDVVSWNTVIAAYAQNDHTRLATLVYMEMQRRGIVPDEYTMSTLLASSESLEVVQMFYAFVLKNGLSLMSEVVNALVSAFSKQGNIDHAYQIFCGKHSKNLITWNAIISGFLLNQRPLQALELFLLMQKLQIWPDVYTLTMVLSICASISSLRHGREVHGYIFTHGLTGETSLGNGLITMYAKCGILNCAAKAFNYMIERDVVSWNAIISAFAQYGEGSKAVEYFTEMQFEIGIRQDQATFTAVLSACSHAGLVCEGIRIFNFMVNDYGFKPGVDHFSCLIDLLGRAGYLDETEELIDSKNSKVDPNVWWTLFSACAAYGNVRLGRIVAGLLLQTQKNDPSVYVMLSNIHANAGQWEDAANIRDMMKRVGVAKQPGYSWIKP*

Click here to download the sequence:
Link to NCBI Protein BLAST