Transcript Information: R_Transcript_229935.p2


Annotated TAIR IDAT3G49740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18447788-18450001 | Forward length=737
E-Value4E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25799238098542
Replicate 20.074191874262537
Replicate 30
Condition 2: 8 Hour
Replicate 10.43261245489833
Replicate 20.15802743350661
Replicate 30.32069983428246
Condition 3: 24 Hour
Replicate 10.40561496868735
Replicate 20.077933776998506
Replicate 30.46405027604729


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_229935.p2 GENE.R_Transcript_229935~~R_Transcript_229935.p2 ORF type:5prime_partial len:283 (+),score=18.60,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|4.6e-06,PPR|PF01535.16|0.31,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|6.1,PPR|PF01535.16|1.8,PPR|PF01535.16|1e-06,PPR_3|PF13812.2|87,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|3.9,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|50,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.0056 R_Transcript_229935:2-850(+)
AAACTCGTAGCAAAGGATGCTACTAAGCAACTCATAAATCTAAACCGTCAGTTAGCAAACTTAACCCGCTCACATTCTCACTACGAAACTCTCCGTCTCTTCCTACAAATCCACGCATCTGAAAGCCTAAGACCAGACCACTATTCTCTCTCCACCGCCCTCACATCCTCTGCCAACTTACCCAACTTGAGATATGGCCACCAGCTTCATGCTCATGCCGTTTACACTGGCCTCGAATTTTACCCCCATGTCTCAAACACTCTGCTTTCATTCTATGCCAAATCCGATGATTTGGGTTCGGTCAAAAGAGTCTTTTGTGAAATGGGTACCCCAGATATTTACTCTTGGACCTCTCTGTTATCAGCATGTGCTAAGCTGGGAGAAGTTGAATATGCCCGCCAACTGCTCGATGAGATGCCTCAAAGAAATGCTGCACCTTGGAACTCTGTAATCACTAGTTGCTCCTCTGAGAATGGCTATCAGGACACTGCATTTAGTTTGTTCAAGAGAATGCATTTGCTGGGTGTGAGCCATGATAATTACAGTTTTGCTAGTGTCCTTAGATCGTGTCCGATTAGGTCCTATGGTTTTGGGAGGGAGGTGCATTCGTTGATTATTAAGAGTGGGTTCTTGAATTGGAATTCAGTGATAAATTCTTTGGTTTCTATGTATTTTAATTGCGGAAACTCCACAGGTGCCCATAAAGTTTTTGGAGAAGCAGACGAGACAGTGCATAATGAGATTACTTATAACGCGATGATAAATGGATTAGTTAGTCTGGAAAGAGGTAATGAAGCCTTGATGATGTTCAAAGAGATGCTAGGGGCTCGTCTAATTCCTACAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_229935.p2 GENE.R_Transcript_229935~~R_Transcript_229935.p2 ORF type:5prime_partial len:283 (+),score=18.60,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|3.2,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|4.6e-06,PPR|PF01535.16|0.31,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|6.1,PPR|PF01535.16|1.8,PPR|PF01535.16|1e-06,PPR_3|PF13812.2|87,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|3.9,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|50,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.0056 R_Transcript_229935:2-850(+)
KLVAKDATKQLINLNRQLANLTRSHSHYETLRLFLQIHASESLRPDHYSLSTALTSSANLPNLRYGHQLHAHAVYTGLEFYPHVSNTLLSFYAKSDDLGSVKRVFCEMGTPDIYSWTSLLSACAKLGEVEYARQLLDEMPQRNAAPWNSVITSCSSENGYQDTAFSLFKRMHLLGVSHDNYSFASVLRSCPIRSYGFGREVHSLIIKSGFLNWNSVINSLVSMYFNCGNSTGAHKVFGEADETVHNEITYNAMINGLVSLERGNEALMMFKEMLGARLIPTG*

Click here to download the sequence:
Link to NCBI Protein BLAST