Transcript Information: R_Transcript_230041.p1


Annotated TAIR IDAT4G33990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2758
Annotation TypeHomolog
Chromosome Positionchr4:16290141-16292612 | Reverse length=823
E-Value2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83292520653866
Replicate 20.98548476530213
Replicate 31.1946147377394
Condition 2: 8 Hour
Replicate 10.79810511562077
Replicate 21.0203792235222
Replicate 31.3252805668079
Condition 3: 24 Hour
Replicate 11.4367336987351
Replicate 20.97767770831764
Replicate 31.7692799095015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_230041.p1 GENE.R_Transcript_230041~~R_Transcript_230041.p1 ORF type:5prime_partial len:767 (+),score=99.73,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|0.0042,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|60,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|54,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|90,PPR_2|PF13041.2|2.4e+03,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.34,PPR|PF01535.16|0.42,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|2.5,PPR|PF01535.16|0.25,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.88,PPR|PF01535.16|0.0091,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00043,PPR|PF01535.16|0.93,PPR|PF01535.16|0.47,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|39,PPR_3|PF13812.2|39,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|15,PPR_1|PF12854.3|35,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.89,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.2 R_Transcript_230041:1-2301(+)
CCTTTTTCCCCATTCCATGATAGTCCCTCAAAAAAAATCTTGAAAGCTCTTGGTAATCCAACATCTTTCTTCAACTACCAGACTACCCCAAGTTTCATTATTTTTCCCTTTTTCAACATATTCACTCCTCTCAATGGCTTCCTTAGATTTTTTATTCCACTATCCATCTTCAGATTTTCACCTCTTCTTCACTCCAATCACTTAAATCCTTCACCTTTCTCTACCCTTTCTTCTTCTTGCTTAGATTCTTGCCAAGACCTTCAATCCCTCAAAGCTATTCATGCCCATCTCATTGTCTCTTCTCAGTACCACTTCCCTCCAATTAGCTCAAAGCTTATCACTTTGTATGCCAATTTTGGTGATTTAAGGACCCCTTTGTCAATTGTGAGCTCCTTACATGAATCCAACTCTAAAGTTTGGAACTATATGTTGAAATCATCTCTTGACCTTGGCTTTTTTGAGATGGGTATTGAAGTTTATAAGCAAATGAGGCAGTTAGGTGATGTCGAGCATGATGGTTTCACTTTATCAATTGTTAATCAATTATATATGATGTTATGTTGTGATGTTAGATATGCTAAGATGATTCATTGTGTTGGGATTCAAATGGGTTATACTAAAGATGTGTACTTTTGCAATACCCTGATTAATTTTTACTTGAAATGTTGTTATGCAAGTTTAGCCAACCAGGTGTTCGATGAAATGTCTCATAGAGATGTTGTATCTTGGACTTCAATGATTTCATGTTATGTTAGTGAAGGAAACATATCCCTTGCTTTTGAGTCGCTCAGTGAAATGAGAAATGAGGTAGAACCCAATTTTGTGACTGTAATCACATTATTGCAGACATGTTCAACTAGTGGGGATGTGATTTTAGGCAACCAATTTCATGGCTATCTAATAAAGAAAGGGTTTCTAAATGATTGGTCTGTGAGAAATTCACTATTGCAGATGTATGCTAACAAGGGTACCCCTAAAGATGTGGAAATGCTCTTTTCTGAATTGGTTACAATTGATGTTGTCACTTGGAATATATTGATTTCATTTTACCTCTCAGTTGGAAATATTATAGGAGTGATTGAAAATTTTCATGATATGCTTAGAGAACAAGGGATTACACCTAGTTTGGAGACATTAACCTTAATGGCATCGTCGCTATCCAAATGTGGAAGCTATGCTCAAGGTCAACAGCTGCATTGCTTTGCCATGAAGACTGGTTTGTCTGACCAGGTCTTTCTGACTTGTTTGATGGATCTCTATAGTAAGTTTGGTGATTTGGAAGCTTCCCTTAGATTGTTCACCAAAATCCCTTGTGAGAGTAACACCATTACGGTGAGCACTCTGATGTCTGGTTTTATCGAACATGGGGAATATGAAAAGGCCATTGGTTTGTTCAAGCGACGACAATCTGCTAGAGTTGAACCCACTGTCGATATAATAAAAGCTCTTCTTGATGTATGTGGTGACACTGGAGCTTTACATATGGGTAAAGAAATTCATGGTTACTACATGAAGGATTCATTCCGTGATTCATCAGAAAGCAATTCGGTGTTGGAGACCTCTATTTTGAACATGTACATAAGATGTGGAAGCCTTTTGTATGCAAGGCATTGTTTCAGAATGATGGTCAAGAAAGATGTTGTAGCATGGACGTCTATGATCGAGGGCTTGGGAACCTATGGGCTCGGCCTTGAAGCCTTGGCACATTTCGATCAAATGCTGAAAGAGGGTATCAAACCAACTACCATTACATTCTTAAGCATACTATCTGCCTGTAGCCACTCAGGCCTAACAAACGAAGGATGTGATCTCTTGTATGCAATGAAATGGGAATTTGGTGTCGAGCCTGAACTGAATCATTACACATGCATCGTTGATCTTTTGGGGCGATCAGGAAAGCTCAAAGAGGCTCTTACTGTAATTCTGAAACTGGTGGCTTGTCCTGATAGTAGGATATGGGGTGCACTGCTTTCAGCCTCTAGAGTATATATGGACAGAAAAATTGGCAATTATGCTGCCAAATGCCTCTTAGAGTTAGAACCAGATAATATTGGATACCAAATCATCTTCAGTAATATGCAAGCTAGTGCAGAACAGTGGAATCAAGTGGAAGAACTGAGAAACATAGTAACTGAGGTGAATCCAAAGAAGACGCCTGGATGGAGTTGCATTGAAACAAACGGGGAAATTCAGGGTTTTATATCCGGAGATAGATCACATCCTGATGTAGAGGTTGTTTATGAGCTATTAGGGCTCTTGAGCAGGCAAATGAAGGATCCTGATTTGTGTTTGTTAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_230041.p1 GENE.R_Transcript_230041~~R_Transcript_230041.p1 ORF type:5prime_partial len:767 (+),score=99.73,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|0.0042,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|60,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|54,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|90,PPR_2|PF13041.2|2.4e+03,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.34,PPR|PF01535.16|0.42,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|2.5,PPR|PF01535.16|0.25,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.88,PPR|PF01535.16|0.0091,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00043,PPR|PF01535.16|0.93,PPR|PF01535.16|0.47,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|39,PPR_3|PF13812.2|39,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|15,PPR_1|PF12854.3|35,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.89,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.2 R_Transcript_230041:1-2301(+)
PFSPFHDSPSKKILKALGNPTSFFNYQTTPSFIIFPFFNIFTPLNGFLRFFIPLSIFRFSPLLHSNHLNPSPFSTLSSSCLDSCQDLQSLKAIHAHLIVSSQYHFPPISSKLITLYANFGDLRTPLSIVSSLHESNSKVWNYMLKSSLDLGFFEMGIEVYKQMRQLGDVEHDGFTLSIVNQLYMMLCCDVRYAKMIHCVGIQMGYTKDVYFCNTLINFYLKCCYASLANQVFDEMSHRDVVSWTSMISCYVSEGNISLAFESLSEMRNEVEPNFVTVITLLQTCSTSGDVILGNQFHGYLIKKGFLNDWSVRNSLLQMYANKGTPKDVEMLFSELVTIDVVTWNILISFYLSVGNIIGVIENFHDMLREQGITPSLETLTLMASSLSKCGSYAQGQQLHCFAMKTGLSDQVFLTCLMDLYSKFGDLEASLRLFTKIPCESNTITVSTLMSGFIEHGEYEKAIGLFKRRQSARVEPTVDIIKALLDVCGDTGALHMGKEIHGYYMKDSFRDSSESNSVLETSILNMYIRCGSLLYARHCFRMMVKKDVVAWTSMIEGLGTYGLGLEALAHFDQMLKEGIKPTTITFLSILSACSHSGLTNEGCDLLYAMKWEFGVEPELNHYTCIVDLLGRSGKLKEALTVILKLVACPDSRIWGALLSASRVYMDRKIGNYAAKCLLELEPDNIGYQIIFSNMQASAEQWNQVEELRNIVTEVNPKKTPGWSCIETNGEIQGFISGDRSHPDVEVVYELLGLLSRQMKDPDLCLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST