Transcript Information: R_Transcript_230078.p1


Annotated TAIR IDAT2G27480.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11746811-11747885 | Forward length=228
E-Value2.1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.452954670042
Replicate 213.343443255217
Replicate 317.12653278217
Condition 2: 8 Hour
Replicate 116.476469871043
Replicate 225.077624494788
Replicate 319.339099165646
Condition 3: 24 Hour
Replicate 116.950156738211
Replicate 214.840921870295
Replicate 315.341849079601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_230078.p1 GENE.R_Transcript_230078~~R_Transcript_230078.p1 ORF type:5prime_partial len:107 (-),score=18.81,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|1.6e+03,EF-hand_1|PF00036.28|7.1e+03,EF-hand_6|PF13405.2|2.5e-05,EF-hand_6|PF13405.2|4.6e+03 R_Transcript_230078:138-458(-)
CTTGGTGAATGGCGTGTGATATTTCAGAGATTTGATAAAGATCGGACTGGGAGAATCAATGAAGGAGAGTTAAGGGATGCCTTTTATGGTTTAGGGTATGCAGTGCCACCTTCAGTACTTCACCTTTTGATTTCCCATTATGACGATGGGAGTGGCCGAAGGGTTGCCCTTGATTTTGATAGCTTTGTTGAGTGTGGAATGGTTATAAAGGGTTTGACCGAGAAATTCAAAGAGAATGATCCACAGTACACCGGTTCTGCAACCATGTCTTACGACAGCTTCTTCTCCGTGCTTCTTCCATTTATTGTTACGTACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_230078.p1 GENE.R_Transcript_230078~~R_Transcript_230078.p1 ORF type:5prime_partial len:107 (-),score=18.81,EF-hand_1|PF00036.28|2.5e-06,EF-hand_1|PF00036.28|1.6e+03,EF-hand_1|PF00036.28|7.1e+03,EF-hand_6|PF13405.2|2.5e-05,EF-hand_6|PF13405.2|4.6e+03 R_Transcript_230078:138-458(-)
LGEWRVIFQRFDKDRTGRINEGELRDAFYGLGYAVPPSVLHLLISHYDDGSGRRVALDFDSFVECGMVIKGLTEKFKENDPQYTGSATMSYDSFFSVLLPFIVTYN*

Click here to download the sequence:
Link to NCBI Protein BLAST