Transcript Information: R_Transcript_230406.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65748229854047
Replicate 20.50419932389052
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 10.67199629357791
Replicate 20.65203257512891
Replicate 30.96517998153001
Condition 3: 24 Hour
Replicate 10.74819611891317
Replicate 20.94576581863539
Replicate 31.1638402149122


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_230406.p1 GENE.R_Transcript_230406~~R_Transcript_230406.p1 ORF type:complete len:583 (+),score=96.26,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|6e-05,PPR|PF01535.16|9e+02,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00081,PPR|PF01535.16|0.48,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|2.6e+03,PPR_2|PF13041.2|7.4e+02,PPR_2|PF13041.2|0.00071,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|6.4,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|4.3e+03,PPR_1|PF12854.3|7.4e-06,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|95,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|6e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|23,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|52,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.4e+03 R_Transcript_230406:173-1921(+)
ATGGTAATGTTCCCTTGCCTACAAACCTGTGCTTCTCTGCTAGCACAGTGTATAGCAACCAGAGACCTCACCTTATGCAAAACCCTTCATTCCCACTTCATAAAAACCTCCCTCATTTGCAACACCTTCATTTCTAACCGCCTTGTGGAATTCTACTCCAAATCCAACTCCATTCAATGTGCCCAGAAAGCTTTTGATGATCTTGCTGACAAAAACAGACACTCCTGGAATGCACTGGTTTCTGGTTACTGCAAAAATGGGCTATGCCCCCTCGCACGCCAACTGCTCGAAGAAATGCCTGAACCAGATATTGTCAGTCATAATTCTGTTATTTCTGGTTTAAGCCGTCATGGGTTTTATAAAGAGTCTCTGGGTTTGTTCAAGAAGATGCAGAACATGTACAGTGAGCTGTTCCTTGATGAGTATACAGTTGTCAGTGCTGTGAGCAGTTGTGGGTTTCTTGGTTCAGTGCGGTTATTGCGACAACTTCATGGTATAGTTATTGTGCTCGGGTTACAGGTTGATGTTATTGTATGCAATGCTTTGATTGATGCCTATGGAAAATGTGGCCTGCCTGATTTATCTTACTCGATATTTGATCGCATGGTTGAACGAGATGTTGTGTCGTGGACTTCGATGGTGGCTATCTTCAGCAGGGCGTCTAGATTGGAAGATGCTATTCGGATTTTTAATCAAATGCCAGTGAAGAATTCAGTATCTTGGACTGCAATCATTGCTGGGTTATCTCAAGGTGGGCGAGGAATGGAAGGATTGTATCTCTTTAATCAGATGCAGAAAGATGGAGTGCTGCCTAACACATTTACATATGTAGCTGTGCTAGGAGCTTGCGCTGATTTAGCGCTCATTGAGAAGGGAAAACAACTTCATAGTCACATCATTAGATCGAGTACCAAGAGTCCTTTGTTGAATGTGTACATATACAATGCTTTGATCGACATGTATTGCAAGTGTGGAGATATGAGATCAGCAAGACTGTTGTTTGAGAGTTTGTCAGAGAAGGATATTGTTTCTTGGAACTCCATAATAACTGGGCTAGCTCAGAATGGCCTTAATGGAGAAGCAATTGAAACATTCGGAAGGATGATTGAAGCAAAAGTGAAGTCAAACGACATCACATTTCTCGCTGTACTGTCTGCTTGTAGCCATACAGGCCTGGTAGATGAAGGCATGAGGATTTTCGACATGATGGCAAAGCACGGAATGAAGCCAAGATCAGAGCATTATGCAATTCTAATTGACTTGCTCGGAAGGAAGAACAGACTCAATGAAGCTGTCAAGTTGATCAAGAGAGTTCCTGGTAGCTCTGATCATGTTGGAATGTGGGGCGCACTTTTAGGTGCTTGCCGGGTTCATGGTGACATGAATCTAGCTAGAAAGGCTGCAGAAATGCTCTTTCTGTTGGAGCCAAGCAACTCTGGTCGATATGTCATGCTATCAAATATATACGCGGCCAGTAAAAGATGGGATGATTCTCGTCAAGTGAGAAGAATCATGGGTGACAGAGGATTAAGGAAAGAAACAGCTTTTAGTTGGATTGAAGTGAAAAACACAAGACATGAATTTGTAGCCAAAGACACTTCCCACTTGCATACGGATCATATATATGAAGTAATTCATGGACTCTTGGATCAAATGAGGGAAGCTGGTTATAATCCTTGTGGCGAGATAGGTGTTAAAGATGAAGAATTGTGGGATTATGATCTCGGTGCTATAAATCAAACAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_230406.p1 GENE.R_Transcript_230406~~R_Transcript_230406.p1 ORF type:complete len:583 (+),score=96.26,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|6e-05,PPR|PF01535.16|9e+02,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00081,PPR|PF01535.16|0.48,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|2.6e+03,PPR_2|PF13041.2|7.4e+02,PPR_2|PF13041.2|0.00071,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|6.4,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|4.3e+03,PPR_1|PF12854.3|7.4e-06,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|95,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|6e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|23,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|52,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.4e+03 R_Transcript_230406:173-1921(+)
MVMFPCLQTCASLLAQCIATRDLTLCKTLHSHFIKTSLICNTFISNRLVEFYSKSNSIQCAQKAFDDLADKNRHSWNALVSGYCKNGLCPLARQLLEEMPEPDIVSHNSVISGLSRHGFYKESLGLFKKMQNMYSELFLDEYTVVSAVSSCGFLGSVRLLRQLHGIVIVLGLQVDVIVCNALIDAYGKCGLPDLSYSIFDRMVERDVVSWTSMVAIFSRASRLEDAIRIFNQMPVKNSVSWTAIIAGLSQGGRGMEGLYLFNQMQKDGVLPNTFTYVAVLGACADLALIEKGKQLHSHIIRSSTKSPLLNVYIYNALIDMYCKCGDMRSARLLFESLSEKDIVSWNSIITGLAQNGLNGEAIETFGRMIEAKVKSNDITFLAVLSACSHTGLVDEGMRIFDMMAKHGMKPRSEHYAILIDLLGRKNRLNEAVKLIKRVPGSSDHVGMWGALLGACRVHGDMNLARKAAEMLFLLEPSNSGRYVMLSNIYAASKRWDDSRQVRRIMGDRGLRKETAFSWIEVKNTRHEFVAKDTSHLHTDHIYEVIHGLLDQMREAGYNPCGEIGVKDEELWDYDLGAINQTI*

Click here to download the sequence:
Link to NCBI Protein BLAST