Transcript Information: R_Transcript_230408.p1


Annotated TAIR IDAT3G47840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17651912-17654032 | Forward length=706
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20742001084908
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.49744783379312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_230408.p1 GENE.R_Transcript_230408~~R_Transcript_230408.p1 ORF type:internal len:88 (-),score=16.95,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|3.4e-11,PPR|PF01535.16|0.19,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|92,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|9.3 R_Transcript_230408:2-262(-)
GCTGTCTTCAGCAGGGAGTCTAGATTGGAAGATGCTATTCAGATTTTTAATCAAATGCCAGTGAAGAATGCAGTATCTTGGACTGCAATCATTGCTGGGTTATCTCAAGGTGGGCGAGGAATGGAAGGTTTGTATCTCTTTAGTCAGATGCAGAAAGATGGAGTGCTGCCTAACACATTTACATATGTAGCTGTGCTAGGAGCTTGCGCTGATTTAGCGCTCATTGAGAAGGGAAAGCAACTTCATAGTCACATCATTAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_230408.p1 GENE.R_Transcript_230408~~R_Transcript_230408.p1 ORF type:internal len:88 (-),score=16.95,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|3.4e-11,PPR|PF01535.16|0.19,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|92,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|9.3 R_Transcript_230408:2-262(-)
AVFSRESRLEDAIQIFNQMPVKNAVSWTAIIAGLSQGGRGMEGLYLFSQMQKDGVLPNTFTYVAVLGACADLALIEKGKQLHSHIIR

Click here to download the sequence:
Link to NCBI Protein BLAST