Transcript Information: R_Transcript_231193.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.27267922618569
Replicate 30.44623514797699
Condition 2: 8 Hour
Replicate 10.31799824606812
Replicate 20.29040106287254
Replicate 30.11786760143108
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231193.p1 GENE.R_Transcript_231193~~R_Transcript_231193.p1 ORF type:5prime_partial len:154 (+),score=11.33,PIF1|PF05970.10|9.9e-38 R_Transcript_231193:2-463(+)
CCAAATTTGCGAGACAATATCGATGATTCTATTTACTTTCAGCAAAGGGCAATATTAGGTCCTACTAATGAAGTTGTTGAAGATATCAATTCATACATGTTGGATCTATTGCCTGGTGAAAAGAAAGTATATAGAAGTTATGATTCAGTCTGTCCAGAGGATACACATGATGTTGCAGATGATGAGATCTATTTAGCTGACTACTTAAACAGTTTAAAATTTTCTGGGTTATCGAATCATGAACTTACCCTTAAAGTAGGTGCTCCGGTCATGCTGCTTAGAAACATTGATTGCTCAGGAGGTTTGTGTAATGGCACCAGGTTACGTATCACCAAATTGGGTAATAATGTTATTGAAGCAGAGGTTCTCACAGGTAGCAGGATTGGAAATAAGGTGTTTATACCTCGATTTTCACTAACGCCATCTGATACACATTTACCGTTCAATTTTAGTAGGCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231193.p1 GENE.R_Transcript_231193~~R_Transcript_231193.p1 ORF type:5prime_partial len:154 (+),score=11.33,PIF1|PF05970.10|9.9e-38 R_Transcript_231193:2-463(+)
PNLRDNIDDSIYFQQRAILGPTNEVVEDINSYMLDLLPGEKKVYRSYDSVCPEDTHDVADDEIYLADYLNSLKFSGLSNHELTLKVGAPVMLLRNIDCSGGLCNGTRLRITKLGNNVIEAEVLTGSRIGNKVFIPRFSLTPSDTHLPFNFSRR*

Click here to download the sequence:
Link to NCBI Protein BLAST