Transcript Information: R_Transcript_231194.p2


Annotated TAIR IDAT3G51690.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19176731-19178107 | Reverse length=331
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19948591207343
Replicate 20.11473388205627
Replicate 30.25034685897434
Condition 2: 8 Hour
Replicate 10.53521016278132
Replicate 21.4662873338482
Replicate 30.29756738721946
Condition 3: 24 Hour
Replicate 10.25090499702409
Replicate 20.96416432308535
Replicate 30.35881483093274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231194.p2 GENE.R_Transcript_231194~~R_Transcript_231194.p2 ORF type:3prime_partial len:183 (+),score=24.39,PIF1|PF05970.10|1.6e-55 R_Transcript_231194:2002-2547(+)
ATGCGCTTGCAATCATCAAACTCTTATACTGAAGCCAATTATATCAAAACTTTTGCCGATTGGATTTTAAAGGTTGGTAATGGTGACATTGGTGAAGATGATGATGGTATAGCTGAATTTGAACTCCCTCCTGACTTGGTAATAAGTTCTAATGTTCAAGATCCAATTGCTACCATTGTCCAAGATACCTATCCTGACTTTGTGATGAGGTTGGATGATTCGCTTTACTTTCAACAACGGGCAATATTAGGGCCAACTAATGAGATTGTGGACGAAATCAACTCATATATGTTGTCTTTATTGCCTGGTAAAGAGGAAGTATATAGAAGTTGTGACGCGATTTGTTCAGATGATGCGATGAACTTTGCAGAGGATGAGGTATATTCCATAGAGTATCTTAACAGTTTGCAGTGTTCTGGGCTGCCTAATCATGAGCTCAAATTGAAAGTAGGTGCTCCGATCATGTTGCTTCGAAATATTGATTGCTCAGGTGGTTTATGCAATGGTACTCGATTACGTATAACTAAACTGGGTAGAAAAGTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231194.p2 GENE.R_Transcript_231194~~R_Transcript_231194.p2 ORF type:3prime_partial len:183 (+),score=24.39,PIF1|PF05970.10|1.6e-55 R_Transcript_231194:2002-2547(+)
MRLQSSNSYTEANYIKTFADWILKVGNGDIGEDDDGIAEFELPPDLVISSNVQDPIATIVQDTYPDFVMRLDDSLYFQQRAILGPTNEIVDEINSYMLSLLPGKEEVYRSCDAICSDDAMNFAEDEVYSIEYLNSLQCSGLPNHELKLKVGAPIMLLRNIDCSGGLCNGTRLRITKLGRKVI

Click here to download the sequence:
Link to NCBI Protein BLAST