Transcript Information: R_Transcript_231197.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31290790208089
Replicate 20.38993129344554
Replicate 30.26179128681317
Condition 2: 8 Hour
Replicate 10.10493942120248
Replicate 20.22360881841186
Replicate 30.25930872314838
Condition 3: 24 Hour
Replicate 10.26237493974519
Replicate 20.15753756350412
Replicate 30.062536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231197.p1 GENE.R_Transcript_231197~~R_Transcript_231197.p1 ORF type:internal len:700 (+),score=122.71,PIF1|PF05970.10|2.6e-142,AAA_30|PF13604.2|2e-06,AAA_30|PF13604.2|6.2e+03 R_Transcript_231197:1-2097(+)
TTGTCATTTAGCTTGGATGGGAAACATAGTGTTATCTACGATGAACATGAATCTCTTGAGGATGTTGCAGAGAGAAGTGAAGAAGATGGATCAATGTTTATGGAGTGGATGAATTGTAATAAGGTGAATGAACTTGCTAGAACATTGACCTATGCTGAATTCCCTTCTGAATTTGTGTGGTATAAACAGGACAAGATATGGCTTCCTAGGAAAAAGAAAAGGGGTAAGGTGATAGGTCGCATATATCATGTGCCTCCTCATGCTAGAGAGACATATTATTTGCGTCTTTTGCTAAATGTTCAAAAGGGTCCAACTTCATATGATGATATTAAGACTGTGCGTGGTGTTGTTCATGATACATTTCAAGCAGCATGTGAAGCTTTGGGTCTTCTGGGTGATGATAAAGAATACACAGAGGCTATCAGGGAGGCATCATTTTGGGGTACTGGTTATTACTTGCGAGCTTTATTTTGCACTTTGTTATTCTCAAACTCCCTTATCCGGCCAGACAATGTGTGGGCGGAAACATGCCATCTTCTATGTGACGGTATTCAAAGGCAACTCCGACAGTCTTTTAACTCAAATGATATTACATTGGATGATAGTGGCCTGAAGTTGCACACGCTAGCTGCAATAGAGAGGATTATGCGTAGATATGGAAAAAGTTTGAAAGATTTTCCGCAAATGCCGACTCCTCCTGACCACTTGGTAGATGATGGTATTAATAGATTGGTATTAGATGAACTTCAATATGATAAGGCGGAACTCTTGATTGAGCATTCAAGATTGTTGCAAAATCTAACCTCAGAACAACGCTTAATTTATGATGAAATCATGAGCGCTGTTCGAGAAGATACTGGTGGGGTCTTCTTTTTGGATGGTTATGGAGGAACAGGCAAAACCTATATGTGGAGAACACTAGCAGCTGCATTGAGATCAAAAGGTGACATTGTGTTGTTGGTAGCATCTAGCGGTATAGCTGCATTATTATTGCCTGGAGGAAGGACAGGTCATTCTAGATTTGCTATTCCTATTAAAATTGACCATACTTCCATGTGTAACTTGAAACCATGGCAAGATTTGGCTGAGTTAATATGGAATGCAAAATTGATAGTATGGGATGAAGCTCCTATGGTACATCGGCATTGTCTTGAAGCGTTGGACAGGACATTGCGTGATGTGTTACGTAGGTTTAATCCTTCTTGCCATAATCTCCCATTTGGTGGAAAGGTTATCGTTTTTGGTGGAGATTTTCGGCAAATATTACCTGTAGTTACCCGTGGTGGTAGGGCAGATATTGTTAATGCAGCAATAAATTCATCTTTAATTTGGAATTGCTGTAAGATATTGCGGCTAACCATGAACATGCGCCTGCAATCATCAAGCTCATCTATTGAAGCCGATGCTATCAAAGAGTTTTCTGATTGGATTTTAAAGGTTGGAAATGGATATATTGGCCAAGATGATGATGGCACTGCGGAATTTGAGGTCCCTGATGACTTGGTCATTAATTCAAATGTTGCCAATCCAATAGCTACCATTGTTGAGGATACATATCCAAACTTGCGAGACCGGTTGAGTGATTCTGTTTACTTTCAGGAAAGGGCAATCTTGGGGCCAACTAATGAAGTTGTGGAGGAGATAAACTCATACATGTTGTCTTTATTGCCCGGTGAAGCGAGAGTGTATAGAAGTTGTGACTCAATATGCCTTGATGAGATTCAGAATTATGGAGATGATGAGATATTTTCAACCGACTACCTTAATAGTTTGAAGTGTTCTGGTTTGCCTAACCATGAACTTATATTGAAAGAAGGTGCTCCAGTTATGCTTCTCAGGAATATTGATTGCTCTGGTGGTTTATGTAATGGCACACGATTACGTATAACCAAATTGGGCAATAATGTTATTGAAGCAGATGTTCTCACTGGAAGCAAGATTGGCAACAAGGTCTTCATACCTCGCTTCTCACTCACGCCATCTGATACACGTTTGCCTTTCAAGTTTAGCAGGCGACAGTTCCCTATTAGAATATGTTTTGCAATGACTATTAATAAAAGTCGGGGACAATCGCTTGAACGTGTTGGTGTATATTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231197.p1 GENE.R_Transcript_231197~~R_Transcript_231197.p1 ORF type:internal len:700 (+),score=122.71,PIF1|PF05970.10|2.6e-142,AAA_30|PF13604.2|2e-06,AAA_30|PF13604.2|6.2e+03 R_Transcript_231197:1-2097(+)
LSFSLDGKHSVIYDEHESLEDVAERSEEDGSMFMEWMNCNKVNELARTLTYAEFPSEFVWYKQDKIWLPRKKKRGKVIGRIYHVPPHARETYYLRLLLNVQKGPTSYDDIKTVRGVVHDTFQAACEALGLLGDDKEYTEAIREASFWGTGYYLRALFCTLLFSNSLIRPDNVWAETCHLLCDGIQRQLRQSFNSNDITLDDSGLKLHTLAAIERIMRRYGKSLKDFPQMPTPPDHLVDDGINRLVLDELQYDKAELLIEHSRLLQNLTSEQRLIYDEIMSAVREDTGGVFFLDGYGGTGKTYMWRTLAAALRSKGDIVLLVASSGIAALLLPGGRTGHSRFAIPIKIDHTSMCNLKPWQDLAELIWNAKLIVWDEAPMVHRHCLEALDRTLRDVLRRFNPSCHNLPFGGKVIVFGGDFRQILPVVTRGGRADIVNAAINSSLIWNCCKILRLTMNMRLQSSSSSIEADAIKEFSDWILKVGNGYIGQDDDGTAEFEVPDDLVINSNVANPIATIVEDTYPNLRDRLSDSVYFQERAILGPTNEVVEEINSYMLSLLPGEARVYRSCDSICLDEIQNYGDDEIFSTDYLNSLKCSGLPNHELILKEGAPVMLLRNIDCSGGLCNGTRLRITKLGNNVIEADVLTGSKIGNKVFIPRFSLTPSDTRLPFKFSRRQFPIRICFAMTINKSRGQSLERVGVYL

Click here to download the sequence:
Link to NCBI Protein BLAST