Transcript Information: R_Transcript_231503.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11867985016072
Replicate 20.027303381555654
Replicate 30.14893847591777
Condition 2: 8 Hour
Replicate 10.19104706070673
Replicate 20.26170082779021
Replicate 30.16522922541314
Condition 3: 24 Hour
Replicate 10.029854105627704
Replicate 20.14340220344979
Replicate 30.028462554859424


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231503.p1 GENE.R_Transcript_231503~~R_Transcript_231503.p1 ORF type:complete len:769 (-),score=127.28,RVT_1|PF00078.23|8.6e-28,zf-RVT|PF13966.2|7e+03,zf-RVT|PF13966.2|7.7e-15 R_Transcript_231503:113-2419(-)
ATGGCAGTGAAAATTGATATGGCGAAGGCGTACGACAAGGTAGAATGGACTTGCATATCCCAAATTCTATCAGCTTTAGGTTTCTCTAACAACTTCATTAATCTTATCATGCAGTGTGTGTCTACTACCTCCTTTTCTGTACTGATTAATGGCAGACCTAAAGGGTTTTTCTCACCCCAAAGAAGGCTGCGACAAGGAGATCCTATCTCCCCCTTTATTTTTGTGATTGTCATGGAACTCCTCTCTAGGAAAATTCAACAACAATTGGACTCAGGAGATTGGAAGGGCATCAGCATTAGTAGGAGATGTGAACCTATTGCACACTTGCTATATGCTGATGATTTGGTTCTTTTTGCCAGAGCATCGGAAGATCAAGCACAACTCATAAACAACACCCTCGATTTTATGAAGAGGAATAGTGGGCTGGAAGCAAACAAGATGAAATCTGGGGTTTACTTTAGCAAAAGAACCTCAGCACAAAATATGAGGACCATTAAAAGATGTCTGGGCCTTAGAGAGATGGACCATAATGCAGTTTATTTGGGGCTGCCTTTTTTCAGGAAAGGAGGGAAGTTGAAGAATTTTAATTATATTCTTGAGAGGGTATATAAAAAAATTAGCAGTTGGAAGGCTAAACTGCTCTCTTATGCTGGAAGAGCTACCCTCATCAAATCTGTTGCCTCTGCAATTCCTGTCTATGCTATGGCTACAAACAATCTACCATCAAAACTGTGTAACAAAATTGATGGAGCCATGAGGGACTTCTGGTGGGGTTTTGATAAAGATCACAGAGGCATTTACTACAAGGCTTGGGAGGATTTGTGTCAGCCTAGGGATAGAGGAGGACTAAATTTCAGAAAAATGAAGGTCTTTAATCAGGCTATGCAAGCAAAGATAACTTTGCAATTGTTCTCTAAGGAGGAGAGATTGTGGGTCAAGCAGTTCCTGCAGAAATATTGTTCCAGACATGAGCCTTGGCATACTAAGCCTTGCTTGTCAGACTCGCCTCAATTCAACGAACTCATGAAACTTGGTTCCTGGATCATGAAAGGGTTGTGCTACATGGTAGGAGATGGGAAATCTATTAACATCTGGACGGACCCCTGGGTCCCCAAACTTGAGGGTTTTATACCGAAAATGAAGGAAGGAGTGGAAACTGATCTTGTGAAAGTGGAGGATCTTATACAAGAGCATAGCTGGAATACTCAACTCATAAAGGACTCTTTTGATGAAGGAAGTGCAGATGCAATTCTGAAGATAAAGCTACCTTTGGAACCACAAGAGGATCAGTGTATATGGACTTCAGACAATACTGGATGCTTTTCTGTTAAAAGCATGTTCAAAATCATTCACAACTCTAATGCAACAAGAGATCCTGCCCTGGATTCTAAGTGGTGGAAAATCCTGTGGAAAATGAAACTTCCACAAAGGAACAAAATGCTCATCTGGAGAATTTGCATCCGCAGCCTTCCTCTGAAAGTAGAGATAAAGAAGAGAATTCCCTCCTTTGATGATACATGTCTGTGGTGCAACTCTAACCCAGAGGACTACAACCATCTCTTTTTCCTCTGCCCGTTTGCAAAGAGTATGTGGTTTAGCTGCTTGGGAATGAGAACTGAATATCTATCCCACTGGAATTGGATGTCATGGCTTCAAGCCATTTTGGACCCAGCCCGGATTGGAATTACAGATAGCCTGGAAAGTGAGGAATTCACCCTTAAATGTGGGCTCCTCCTTGATCTTCTTTGGGCTGCAAGAAATAAGACTTTGCACGAAAATATACAACCAGACACAGAGGGTTGTAAGACTATGTTCCAGAAGAAATTGTGGGAGGTAAAGAACTGCTTCATGCCTGAAGAAGACCTCAAAAAGGATTGGAATATTTTCATGAGAAAGTTGGCTGGAGATAAGACTTATTTCACAGATGCAGCTGTAAGGAACTGCAAAGGTTTCACTGCTTGGGTCCGAACAGAGTCACTCAATATCCCCAGGGAGGCTAGATCACATATTGTTACAGTGGAGGATGCTTTTGAGGCAGAGCTTCAGGCACTTGTAAAGATTTTTGAAGATAACTCTGAGGTGGATCTCCAGGGGTGCACTATATTTTCTGATGCAAAGACCTTGGTGGATGCGGTTATAGGAGGACCATCCTTTCACTGGAACTTCTGCAGGGATCTGGAGAAGCTCTGGAAAAATTACAAAGACACTAATTCTACTATTTGCTTTATTCCTAGAGTACAACAGATTTGCTCACTATGTGGCTACACTAGCAGCATCTACAAATTTTGTAGGTTGCTTGATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231503.p1 GENE.R_Transcript_231503~~R_Transcript_231503.p1 ORF type:complete len:769 (-),score=127.28,RVT_1|PF00078.23|8.6e-28,zf-RVT|PF13966.2|7e+03,zf-RVT|PF13966.2|7.7e-15 R_Transcript_231503:113-2419(-)
MAVKIDMAKAYDKVEWTCISQILSALGFSNNFINLIMQCVSTTSFSVLINGRPKGFFSPQRRLRQGDPISPFIFVIVMELLSRKIQQQLDSGDWKGISISRRCEPIAHLLYADDLVLFARASEDQAQLINNTLDFMKRNSGLEANKMKSGVYFSKRTSAQNMRTIKRCLGLREMDHNAVYLGLPFFRKGGKLKNFNYILERVYKKISSWKAKLLSYAGRATLIKSVASAIPVYAMATNNLPSKLCNKIDGAMRDFWWGFDKDHRGIYYKAWEDLCQPRDRGGLNFRKMKVFNQAMQAKITLQLFSKEERLWVKQFLQKYCSRHEPWHTKPCLSDSPQFNELMKLGSWIMKGLCYMVGDGKSINIWTDPWVPKLEGFIPKMKEGVETDLVKVEDLIQEHSWNTQLIKDSFDEGSADAILKIKLPLEPQEDQCIWTSDNTGCFSVKSMFKIIHNSNATRDPALDSKWWKILWKMKLPQRNKMLIWRICIRSLPLKVEIKKRIPSFDDTCLWCNSNPEDYNHLFFLCPFAKSMWFSCLGMRTEYLSHWNWMSWLQAILDPARIGITDSLESEEFTLKCGLLLDLLWAARNKTLHENIQPDTEGCKTMFQKKLWEVKNCFMPEEDLKKDWNIFMRKLAGDKTYFTDAAVRNCKGFTAWVRTESLNIPREARSHIVTVEDAFEAELQALVKIFEDNSEVDLQGCTIFSDAKTLVDAVIGGPSFHWNFCRDLEKLWKNYKDTNSTICFIPRVQQICSLCGYTSSIYKFCRLLDL*

Click here to download the sequence:
Link to NCBI Protein BLAST