Transcript Information: R_Transcript_231673.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3566389898777
Replicate 20.56746757881887
Replicate 31.2897937835671
Condition 2: 8 Hour
Replicate 10.88237351161244
Replicate 20.75543519733735
Replicate 31.1855781711514
Condition 3: 24 Hour
Replicate 10.82730836856591
Replicate 20.64576208463402
Replicate 30.59155958613236


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231673.p1 GENE.R_Transcript_231673~~R_Transcript_231673.p1 ORF type:3prime_partial len:444 (+),score=71.40,UBN2_2|PF14227.2|5.1e-31,UBN2|PF14223.2|1.6e-13,UBN2|PF14223.2|1.3e+04,UBN2_3|PF14244.2|1.5e-07 R_Transcript_231673:124-1329(+)
ATGAAAGCCGCCCTCACTCATCAAGGCTTGAAAAAGGCCTTGGCCGGCAAGGACAAGAAACCCGCTGAAATAACCGACACTCAATGGGAGGAGATTGACGACAAAGCTCTCTCCCTTATTCAACTGAGCCTTACTCGTGAAGTTCTTCGTGAAGTATTCAGCGAGAAGACAACAAAGGCTCTTTGGGACAAACTTGCGGAACTATACAACACCAAGTCGTTCGCTAATAAACTTGTTCTCAAAGACCGTCTCTATCATCTCCGCCAAGATAAAGGTACATCCCTTAAAGATCATCTTGATGAGTTTAATTCCATCTTAGTTGATTTGGAGAATTTGGATGTTACTATTGGTGACGAGGATAAGGCTGTTTTGTTGGTTGTGTCCTTGAATCCCGTAAAGTATAAACACTTTAAAGAGATCATGTTATATGGTAATAGGACCACCCTAACTTTTCAAGAAGTTAAAACCAACCTATTCTCTAAAGAGAAATTTGATGCCGAACATGATAAAACGGATTCAAGAGATGAGGGTTTGTTTGTTAGAGGTAGACCCTCTAATAAATCAGATAAGAAAAACCGTGGTGGTAGATCAAAGTCTAGGGGTAAGAACAATGCCCATAAAAATTGCAAGTATTGTAAGAAACCTGGACACATAGTTGATGAGTGTTTTAAACTCAAAAACAAACTTGAAAGAGAAGAAAAGGCCAAGGGCAAGAAACCTATTGATTCATCCGCCGAGGCGGGTGTAGTTGATTGTCACTCCGATGGTGAATTGTATGTAGCCGTTGATTCTAATGATAAGGCTAAATCTCAATGGATTCTTGACTTGAGTTGTACTTTTCATATGTGTCCACACCGTGACTGGTTTGACTCCTATGAGAGTGTTGAAGGTGGCACCGTATATATGGGTAACAATGCTTCTTGTAAGGTTGTTGGGAGAGGAAACGTTAAAATAAAAATTCATGATGGAACCACCCGTACTCTTTCGGGTGTCAGACATGTTCCCGACCTTCGTAGAAACCTTATTTCACTTGGTACCCTTGAATCTTTGGGTTGTCACTACTCCGCTCAAGGTGGAGTTCTTAAGGTGTCTAAGGGTTCTCTTGTGTTGATGAAAGGCTCTAGAGTTGGGTCTTTGTATGTCTTGCAAGGTTCTACCATCACCGGTTCTGCCGCCATTGCTTCCACATCCTATACCAATGAACCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231673.p1 GENE.R_Transcript_231673~~R_Transcript_231673.p1 ORF type:3prime_partial len:444 (+),score=71.40,UBN2_2|PF14227.2|5.1e-31,UBN2|PF14223.2|1.6e-13,UBN2|PF14223.2|1.3e+04,UBN2_3|PF14244.2|1.5e-07 R_Transcript_231673:124-1329(+)
MKAALTHQGLKKALAGKDKKPAEITDTQWEEIDDKALSLIQLSLTREVLREVFSEKTTKALWDKLAELYNTKSFANKLVLKDRLYHLRQDKGTSLKDHLDEFNSILVDLENLDVTIGDEDKAVLLVVSLNPVKYKHFKEIMLYGNRTTLTFQEVKTNLFSKEKFDAEHDKTDSRDEGLFVRGRPSNKSDKKNRGGRSKSRGKNNAHKNCKYCKKPGHIVDECFKLKNKLEREEKAKGKKPIDSSAEAGVVDCHSDGELYVAVDSNDKAKSQWILDLSCTFHMCPHRDWFDSYESVEGGTVYMGNNASCKVVGRGNVKIKIHDGTTRTLSGVRHVPDLRRNLISLGTLESLGCHYSAQGGVLKVSKGSLVLMKGSRVGSLYVLQGSTITGSAAIASTSYTNEP

Click here to download the sequence:
Link to NCBI Protein BLAST