Transcript Information: R_Transcript_231675.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20224887484453
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.13565576148058
Replicate 20
Replicate 30.30168881917541
Condition 3: 24 Hour
Replicate 10
Replicate 20.48875919979119
Replicate 30.12126152181107


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231675.p1 GENE.R_Transcript_231675~~R_Transcript_231675.p1 ORF type:3prime_partial len:361 (+),score=52.99,UBN2_2|PF14227.2|3.4e-31,UBN2|PF14223.2|1.1e-13,UBN2|PF14223.2|7.7e+03,UBN2_3|PF14244.2|2.2e-07,UBN2_3|PF14244.2|7.3e+03 R_Transcript_231675:124-1080(+)
ATGAAAGCCGCTCTCACTCACCTAGGCTTGAAGAAAGCCTTGGAAGGCAAGGACAAGAAACCCGCTGAAATAACCGACACTCAATGGGAGGAGATTGACGACAAAGCTCTCTCCCTTATTCAACTGAGCCTTACTCGTGAAGTTCTTCGTGAAGTATTCAGCGAGAAGACAACAAAGGCTCTTTGGGACAAACTTGCGGAACTATACAACACCAAGTCGTTCGCTAATAAACTTGTTCTCAAAGACCGTCTCTATCATCTCCGCCAAGATAAAGGTACATCCCTTAAAGATCATCTTGATGAGTTTAATTCCATCTTAGTTGATTTGGAGAATTTGGATGTTACTATTGGTGACGAGGATAAGGCTGTTTTGTTGGTTGTGTCCTTGAATCCCGTAAAGTATAAACACTTTAAAGAGATCATGTTATATGGTAATAGGACCACCCTAACTTTTCAAGAAGTTAAAACCAACCTATTCTCTAAAGAGAAATTTGATGCCGAACATGATAAAACGGATTCAAGAGATGAGGGTTTGTTTGTTAGAGGTAGACCCTCTAATAAATCAGATAAGAAAAACCGTGGTGGTAGATCAAAGTCTAGGGGTAAGAACAATGCCCATAAAAATTGCAAGTATTGTAAGAAACCTGGACACATAGTTGATGAGTGTTTTAAACTCAAAAACAAACTTGAAAGAGAAGAAAAGGCCAAGGGCAAGAAACCTATTGATTCATCCGCCGAGGCGGGTGTAGTTGATTATCACTCCAATGGTGATTTTTTTGTAGCCGTAGATTCTGATGATAATGCTAGAACACAATGGATTCTTGACTTGAGTTGTACTTTTCATATGTGTCCACATCGTAATTGGTTTGACTCCTATGAGAGGGTTGAAGGTGGCACCGTTTATATGGGTAATAATGCTACTTGTAAGTTTGTTGGGAGAGGGAACGTTAAAATGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231675.p1 GENE.R_Transcript_231675~~R_Transcript_231675.p1 ORF type:3prime_partial len:361 (+),score=52.99,UBN2_2|PF14227.2|3.4e-31,UBN2|PF14223.2|1.1e-13,UBN2|PF14223.2|7.7e+03,UBN2_3|PF14244.2|2.2e-07,UBN2_3|PF14244.2|7.3e+03 R_Transcript_231675:124-1080(+)
MKAALTHLGLKKALEGKDKKPAEITDTQWEEIDDKALSLIQLSLTREVLREVFSEKTTKALWDKLAELYNTKSFANKLVLKDRLYHLRQDKGTSLKDHLDEFNSILVDLENLDVTIGDEDKAVLLVVSLNPVKYKHFKEIMLYGNRTTLTFQEVKTNLFSKEKFDAEHDKTDSRDEGLFVRGRPSNKSDKKNRGGRSKSRGKNNAHKNCKYCKKPGHIVDECFKLKNKLEREEKAKGKKPIDSSAEAGVVDYHSNGDFFVAVDSDDNARTQWILDLSCTFHMCPHRNWFDSYERVEGGTVYMGNNATCKFVGRGNVKMK

Click here to download the sequence:
Link to NCBI Protein BLAST