Transcript Information: R_Transcript_231703.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14403449968968
Replicate 20.1315345990658
Replicate 30
Condition 3: 24 Hour
Replicate 10.13504592486885
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_231703.p2 GENE.R_Transcript_231703~~R_Transcript_231703.p2 ORF type:complete len:170 (-),score=24.24,zf-RVT|PF13966.2|4.9e-17,zf-RVT|PF13966.2|1.5e+03 R_Transcript_231703:1073-1582(-)
ATGTTAGCCTTAAGGGATGAGTTCATCAGTTTAACAGGTGGGAAGATCCAAGCTTCAGAACTAATCAGTGAATGGTTAGAGGCGAATGATTCTTTCACCAGGGCTGCCTATCAGACTTTCAGAGGAGGAAACAGAAAGGTGTTCTGGGCAAAAACTGTATGGGACTCTGTAAATACTCCTAAGCATTCAGTTATCACTGTCTTAGCAATTCACAAAGGTCTACCTACTCTAGACAACATCAGTAAGCGAGGTATGCAACTAGCTAATAGATTCATCCTCTGCAGAAGGCAGCAGGAAGACATTCAGCACTTGTTCTTCAATTGTACAGAGACATCAAAAATTTGGCAAGGAGTTCTTACCTGGTTGGGTATTACCAGAAGAGTTAAAAGTTTAAGAGGTGATCTTAAATGGTATGGAGCTCATGTGAAGGGGAAGCAGTGGAGGAAAATATGGAAGAGGTGCGCCTTGGTGGCAACCATTTATGAGATATGGAGAGAACGAAACCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_231703.p2 GENE.R_Transcript_231703~~R_Transcript_231703.p2 ORF type:complete len:170 (-),score=24.24,zf-RVT|PF13966.2|4.9e-17,zf-RVT|PF13966.2|1.5e+03 R_Transcript_231703:1073-1582(-)
MLALRDEFISLTGGKIQASELISEWLEANDSFTRAAYQTFRGGNRKVFWAKTVWDSVNTPKHSVITVLAIHKGLPTLDNISKRGMQLANRFILCRRQQEDIQHLFFNCTETSKIWQGVLTWLGITRRVKSLRGDLKWYGAHVKGKQWRKIWKRCALVATIYEIWRERNL*

Click here to download the sequence:
Link to NCBI Protein BLAST