Transcript Information: R_Transcript_23213.p2


Annotated TAIR IDAT5G60370.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24282858-24284760 | Forward length=413
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1986281200148
Replicate 26.7772868432354
Replicate 36.2341121305984
Condition 2: 8 Hour
Replicate 14.9591625209611
Replicate 27.7838512738304
Replicate 35.3995297415075
Condition 3: 24 Hour
Replicate 15.8121030956213
Replicate 28.0962342762879
Replicate 35.1256017304759


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23213.p2 GENE.R_Transcript_23213~~R_Transcript_23213.p2 ORF type:complete len:158 (+),score=33.96,Exo5|PF09810.5|0.0042,Exo5|PF09810.5|8.5e-17 R_Transcript_23213:946-1419(+)
ATGTTCTTTGGTGCTGAGAGCAGGCTGCAATTGATGTGCTACAAGTTGCTGTGGGACAAATTAGTCTCTGATAACTTTCCTTCTGAACAATTTTTTGATTTCTTTTCCTTGGATCCACAACACATTTTATCAGATGAGGTAAAGAAGAGTACAGCTGACTCCGGTTTAGCTGCTGAGACCCTTGGTGAAGTTGTGAGGTATTTCAGCAATGCTTGTTCCACACTGCCTCCTGCTCATGATCAACTTCTCTTAAGATATGAACTCCAAGAGGATTACTCGTTGATCGGTGAGGATGAATTCACATACGATGGTGACTGGCTTCGGGCGCAAATTCACAGCTGCCTTGAGTTCTGGCAGGGAGAGCGAGATGCCAAGTATGTTCAACAGGAGGAGCGTTGGAAATGCCGGTATTGCCAGTTTGCCTCTGTCTGTCCTTCCCAAAATGATAGTACTAATTCTCAAACAATCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23213.p2 GENE.R_Transcript_23213~~R_Transcript_23213.p2 ORF type:complete len:158 (+),score=33.96,Exo5|PF09810.5|0.0042,Exo5|PF09810.5|8.5e-17 R_Transcript_23213:946-1419(+)
MFFGAESRLQLMCYKLLWDKLVSDNFPSEQFFDFFSLDPQHILSDEVKKSTADSGLAAETLGEVVRYFSNACSTLPPAHDQLLLRYELQEDYSLIGEDEFTYDGDWLRAQIHSCLEFWQGERDAKYVQQEERWKCRYCQFASVCPSQNDSTNSQTIS*

Click here to download the sequence:
Link to NCBI Protein BLAST