Transcript Information: R_Transcript_23216.p3


Annotated TAIR IDAT5G60370.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24282858-24284760 | Forward length=413
E-Value5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.45153334228598
Replicate 30.49261801282048
Condition 2: 8 Hour
Replicate 10
Replicate 20.96175835876067
Replicate 30.97589304410683
Condition 3: 24 Hour
Replicate 10.24685814223338
Replicate 21.4229199284243
Replicate 30.94140665319989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23216.p3 GENE.R_Transcript_23216~~R_Transcript_23216.p3 ORF type:complete len:93 (+),score=24.18 R_Transcript_23216:945-1223(+)
ATGTTCTTTGGTGCTGAGAGCAGGCTGCAATTGATGTGCTACAAGTTGCTGTGGGACAAATTAGTCTCTGATAACTTTCCTTCTGAACAATTTTTTGATTTCTTTTCCTTGGATCCACAACATATTTTATCAGATGAAGTAAAGAAGAGTACAGCTGACTCCGGTTTAGCTGCTGAGACCCTTGGTGAAGTTGTGAGGTATTTCAGCAATGCTTGTTCCACACTGCCTCCTGCTCATGATCAACTTCTCTTAAGCTTTATCAAACATGGTCAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23216.p3 GENE.R_Transcript_23216~~R_Transcript_23216.p3 ORF type:complete len:93 (+),score=24.18 R_Transcript_23216:945-1223(+)
MFFGAESRLQLMCYKLLWDKLVSDNFPSEQFFDFFSLDPQHILSDEVKKSTADSGLAAETLGEVVRYFSNACSTLPPAHDQLLLSFIKHGQT*

Click here to download the sequence:
Link to NCBI Protein BLAST