Transcript Information: R_Transcript_2323.p1


Annotated TAIR IDAT5G08330.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2680828-2681547 | Forward length=239
E-Value3.1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.567667178076
Replicate 210.787754351822
Replicate 313.112132555039
Condition 2: 8 Hour
Replicate 19.5410439277197
Replicate 210.94912145327
Replicate 312.142801587431
Condition 3: 24 Hour
Replicate 121.05785076748
Replicate 213.461313184939
Replicate 316.830890155787


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2323.p1 GENE.R_Transcript_2323~~R_Transcript_2323.p1 ORF type:complete len:290 (+),score=38.70,TCP|PF03634.9|8e-34,TCP|PF03634.9|3e+03 R_Transcript_2323:271-1140(+)
ATGTCGGCTACAGACGGCGCTGCTAACGGTGGGGGCGGCGGCGGCGGCGGAGGAGGAGCGATAATCGATCCACAACAACAAAGACAGGCGGCGGGGACGGCGTTAGGGGTGGTGAAGAAAGCGCCGGCGAAAGACAGGCACAGCAAGGTGGACGGAAGAGGGAGGAGGATAAGGATGCCAATCATATGCGCGGCACGTGTGTTCCAGCTCACTCGTGAATTGGGTCACAAATCCGATGGCCAAACCATCGAGTGGCTCTTACGTCAGGCTGAGCCTTCTATTATTGCTGCTACTGGTACTGGCACTACCCCTGCTTCTTTCTCCACCTCTCTCTCCTCCTCTGCCTCTCACCACCACCACCAGCACCACCTACTCCACCGCTCCGCCGCGTCATCTGGTGGGTCCGACCCCCACAAGCAGCAGCAGCAGTCGGCGGGGCCCACGCCTTTTCTTCTTGGAAAGCGGCTCCGGACGGCGGCGGCCGCGAGTGAGGAGGGGGAGAATCAGAACGGAGTCGTTGACAAAGAGGATATAGTCACCTCGGCTTCCGTGGGGGGGCACACTGCTGGGTACTGGGCCATACCGGCCCGGCCCGATTTCTGGAGCTTTGCTACCCCCGAGATGGTTGTGGGCCCCACTGGTCTGGCCCCTATGGCTGGGAGGTTCTTGAGTCAGCAACCACAACAGCAGCAGCAGCAGCAGTCGGCGGCTACTTCTATGGCGGCGGCGGCGGTTGAAGCCACTAGGGTTGGGAATTTCATGCCGATTGCTCAGGGACATCATCTCAATCTACTCGCCTCGCTCTCCGGAGCTCCGGCCTCCGGTGCTGGCGGAGCTTCGTCTGGACGGAGAGACGACGATCCTCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2323.p1 GENE.R_Transcript_2323~~R_Transcript_2323.p1 ORF type:complete len:290 (+),score=38.70,TCP|PF03634.9|8e-34,TCP|PF03634.9|3e+03 R_Transcript_2323:271-1140(+)
MSATDGAANGGGGGGGGGGAIIDPQQQRQAAGTALGVVKKAPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTSLSSSASHHHHQHHLLHRSAASSGGSDPHKQQQQSAGPTPFLLGKRLRTAAAASEEGENQNGVVDKEDIVTSASVGGHTAGYWAIPARPDFWSFATPEMVVGPTGLAPMAGRFLSQQPQQQQQQQSAATSMAAAAVEATRVGNFMPIAQGHHLNLLASLSGAPASGAGGASSGRRDDDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST