Transcript Information: R_Transcript_23233.p1


Annotated TAIR IDAT3G01610.1
Annotated Gene Namecell division cycle 48C
Annotated Gene Symbol(s)CDC48C, emb1354
Annotation TypeHomolog
Chromosome Positionchr3:231787-235057 | Forward length=820
E-Value8E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1742921399563
Replicate 25.8946832719553
Replicate 36.0023002257298
Condition 2: 8 Hour
Replicate 15.8268502147188
Replicate 27.3539798568605
Replicate 38.7846030007755
Condition 3: 24 Hour
Replicate 19.3918302295153
Replicate 28.0200941420281
Replicate 38.485874811765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23233.p1 GENE.R_Transcript_23233~~R_Transcript_23233.p1 ORF type:5prime_partial len:374 (+),score=89.33,AAA|PF00004.25|3.7e-42 R_Transcript_23233:3-1124(+)
AAACTAGCCAGGGCCACTCCTGGCTTTGTTGGTGCTGACTTGACAGCTTTGGCTAATAAGGCTGGTAATCTTGCGATGAAAAGAATCATTGATCAAAGGAGGCTGGAGCTGTCTAAAGAGGACAGGGAACATGCGGAGGAGTGGTGGAAGGAACCTTGGTCTCCTGAAGAGATGGAAAAGCTAAGCATTACAATGACTGATTTTGAGGAGGCTGCAAAAATGGTGCAACCATCTTCAAGACGAGAAGGTTTCTCTGCCATTCCTAATGTCAAGTGGGAGGATGTTGGGGGGCTCAATCGGCTGCGGGAGGAGTTTGAACGCTTTGTTGTTAGACGTATAAAATATCCTGAACATTATGAGGAATTCGGAGTGGACATGGAAACTGGGTTTTTGCTTTATGGACCCCCTGGTTGTGGCAAGACTCTGATAGCGAAGGCTGTTGCTAACGAAGCTGGAGCCAATTTTATACACATCAAGGGTCCTGAACTTTTAAACAAATATGTTGGTGAAAGTGAATTGCATGTACGGACGATATTCAGTCGTGCAAGGACGTGTGCTCCATGCATACTTTTCTTTGATGAGGTCGATGCTTTGACAACTAAGCGTGGAAAAGAAGGGGGTTGGGTTGTTGAACGGCTTTTGAACCAGCTTTTGATTGAGTTAGATGGTGCTGAGCACAGGCGTGGCATCTACGTGATTGGTGCGACAAATAGGCCTGAGGTGATGGATTGTGCAGTTCTGAGGCCGGGGAGATTTGGGAAACTACTATATGTCCCTCTGCCTAGTCCTGACGAGCGTGGCTTGATCTTACAAACGTTAGCTAGAAGAAAACCGATAGATGCAAGTGTGGATCTGCTCACCCTGGGAAGTAGCGCAACATGTGAAAATCTGAGTGGCGCTGACCTTGCTGCACTGATGAATGAAGCGGCAATGGCTGCCTTGGAAGAGAAGTTGACAACTTTTGAAGAGAAGCTGTCATCAAAGCAAAGTGTCTCAGATGCCACTCCATTCACCATCAAGTGTACACATTTTGAGCAAGCCCTGAGGAAAGTTACCCCTTCTGTTTCCGAAAAGCAAAAGCAGTTCTACGAGCGATTTTCATTGAGCTTTCAAGCAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23233.p1 GENE.R_Transcript_23233~~R_Transcript_23233.p1 ORF type:5prime_partial len:374 (+),score=89.33,AAA|PF00004.25|3.7e-42 R_Transcript_23233:3-1124(+)
KLARATPGFVGADLTALANKAGNLAMKRIIDQRRLELSKEDREHAEEWWKEPWSPEEMEKLSITMTDFEEAAKMVQPSSRREGFSAIPNVKWEDVGGLNRLREEFERFVVRRIKYPEHYEEFGVDMETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELHVRTIFSRARTCAPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEHRRGIYVIGATNRPEVMDCAVLRPGRFGKLLYVPLPSPDERGLILQTLARRKPIDASVDLLTLGSSATCENLSGADLAALMNEAAMAALEEKLTTFEEKLSSKQSVSDATPFTIKCTHFEQALRKVTPSVSEKQKQFYERFSLSFQAV*

Click here to download the sequence:
Link to NCBI Protein BLAST