Transcript Information: R_Transcript_232808.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value3.6E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87514196358241
Replicate 20.43143083047188
Replicate 30.62758185194938
Condition 2: 8 Hour
Replicate 10.50313421124476
Replicate 20.15315672493963
Replicate 30.62163050069818
Condition 3: 24 Hour
Replicate 10.78622627492137
Replicate 20.75531708529374
Replicate 30.44974735658008


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_232808.p1 GENE.R_Transcript_232808~~R_Transcript_232808.p1 ORF type:5prime_partial len:146 (+),score=23.89,Glyco_hydro_28|PF00295.13|5.6e-32 R_Transcript_232808:2-439(+)
GATCTGAATGAACCAGGAGTGCAAAATATAACAGTGAAAACTGCAACATTTGTTGGTACTCAAAATGGAGTGCGAATCAAGTCTTGGGGAAGACCAAGTAGTGGTTTTGTGAAGGATGTGTTGTTCCAACACATTACCATGGTGAAGGCTCAAAATCCCATTATCATTGACCAAAATTACTGCCCTAGTCATAAGAATTGTCCTGGACAGGATTCAGGAGTGGGAATAAGTGGAATAACATATCAAGATATTCATGGATCATCTGCCACACCAATTGCCATAAAATTTGATTGCAGCTCAAAGAGTCATTGTACAGACATTAGATTAGAGAATGTACAGCTTACCTACAACGATAAACCAGCTTCCACAATTTGTAACAATGCTGGTGGATCCACTTATGGTTTTGTTCAGCCTGAAAGCTGTTTGTACAAGTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_232808.p1 GENE.R_Transcript_232808~~R_Transcript_232808.p1 ORF type:5prime_partial len:146 (+),score=23.89,Glyco_hydro_28|PF00295.13|5.6e-32 R_Transcript_232808:2-439(+)
DLNEPGVQNITVKTATFVGTQNGVRIKSWGRPSSGFVKDVLFQHITMVKAQNPIIIDQNYCPSHKNCPGQDSGVGISGITYQDIHGSSATPIAIKFDCSSKSHCTDIRLENVQLTYNDKPASTICNNAGGSTYGFVQPESCLYKS*

Click here to download the sequence:
Link to NCBI Protein BLAST