Transcript Information: R_Transcript_233049.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value8E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7521795546976
Replicate 22.5108227534221
Replicate 32.1437848010264
Condition 2: 8 Hour
Replicate 10.67898412332049
Replicate 20.77507389397524
Replicate 30.78646493155923
Condition 3: 24 Hour
Replicate 11.5517408698102
Replicate 21.8347529059752
Replicate 31.2138761698106


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_233049.p1 GENE.R_Transcript_233049~~R_Transcript_233049.p1 ORF type:complete len:577 (+),score=77.63,RVT_3|PF13456.2|9.2e-18,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.1e-15 R_Transcript_233049:1077-2807(+)
ATGGTGGTCGGTAGGTCGAAAAAGCCGCTATACAATTCGTTACAAGAACGGTTGTGGAAAAAGCTCCAGGGCTGGAAAGGTATGTTGCTTTCTAAAGCGGGCAGAGAGGTCATGATTAAGGCTGTGGCCCAATCTATCTCTACCTACGCAATGAGTGTCTTCAAACTGCCAACATCCTTTTGCAATAAAGTTCGGTCTCTAGTCTCTAAGTTTTTCTGGGGCCAAAAAAGGGAAGAACGCAAAATTCATTGGGTGGCATGGCAGAAGCTATGTCGACCGAAGAAGAGAGGGGGCCTGGGATTTAGAGACTTAAAAATGTTTAACTGGGCTTTACTTGCCAAACAGGCTTGGAGATTGGCTCGTGGTGAAGGTGGCTTGCTGGGAGATCTTTTGAAAGCGCGTTACTATCCAGAGGGGGATTTCCTTAATTCAGCCATTGGGAGCAATCCGAGCTTTTCTTGGAGGGGTATTTGGGAGGTGAAATGGGTGGTAAGAAAGGGTTTGAGATGGAGGATTGGGAATGGACAGAATGTGCGTGTATGGGTTGATCCTTGGGTATGCAACAATGCAAAGGGTCTAGTGATCTCACCACGTGGGAATTATGACCGTGATATGAGAGTGAGTAATCTAATTGATCCTAGCTCTGGCTCTTGGGATAAATCCAGTATCCAAACCCTCTTTTTACCTTTTGAGAGGGAAAGGATCCTTGCTATCCTCTTAAGTGCTAGACGACCCCCAGATTCAATTTACTGGGCTTGGGAAAAGAATGGAGATTACTCAGTAAGAAGCGCATACCATGGGATTATGGAGTATGAAGTCTTCCAGGAGGTCCCATCTTCGTCGTCGATGAACCAGAACTTATGGCCGAAAATCTGGAGCTTGGAAGTGCTACCTCGCGCGAAAATGTTCTTGTGGAGGGTATGTAACAACGCTATCCCAACCAGGGTGGGGCTTCATCGGCGTATTAATGACATACAGGAAGATTGTGGGTTTTGTCGTGATCGGGTGGAAAGTACATTACATGTTCTCCGGGAGTGCCCACGAGCTGAACAAATTTGGGAGAGCAGTGGGCTGGAAATTTCTCACATTTCTTATGGTCCGGATGCGAGAGAGTGGGTAGAAAAGGTGATGGAAGAGTTGGATCTCAGAGAAAGGAATTGGTTTGTTTTGGTATGTTGGGCAATCTGGGGGGGCAGAAATAGGTGGTTATTCCAGGGAGAGTTGGACTCAGCTCATGAGCTGTTGGCTTTTGCGAAGAAGTATTTGGAGGGGGACCCAAAGTCAAAAAAGCAACTGAGGAAGGATGGTAGAGCTCTTCCTGTTATTTGGTCTCCTCCGGCACCTGGAACGACGAAATTGAACGTTGATGCCGGACGAATTGGTGAGCAAGGCACTTGCCTGGGAATTGTATGCCGACAAAGTGATGGCTTTCCCATTGTGGCGGCTACCTACAACTTTGAGGAGAATTGGGAAATTTCTATTGCTGAAGCAAAGGCTATGATGTTGGGTCTTCAAGTAGCCTACACCTATGGTTTCAATGAGATAGTGGTGGAGACTGATAACCTGTCAGTGTTTAATGCTTTGCAGCATGGTACTAGTGGTCTAAGTCCTTTAGATTTACTTGTTGAGGATATTTTAGATTTTTCTTCTGTTTTTTCACATATTAGTTGGCCTTTTGTTCGTAGGAATGGTAATAATGTAGCCCATGAGGTAGCGCATGTGCTCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_233049.p1 GENE.R_Transcript_233049~~R_Transcript_233049.p1 ORF type:complete len:577 (+),score=77.63,RVT_3|PF13456.2|9.2e-18,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.1e-15 R_Transcript_233049:1077-2807(+)
MVVGRSKKPLYNSLQERLWKKLQGWKGMLLSKAGREVMIKAVAQSISTYAMSVFKLPTSFCNKVRSLVSKFFWGQKREERKIHWVAWQKLCRPKKRGGLGFRDLKMFNWALLAKQAWRLARGEGGLLGDLLKARYYPEGDFLNSAIGSNPSFSWRGIWEVKWVVRKGLRWRIGNGQNVRVWVDPWVCNNAKGLVISPRGNYDRDMRVSNLIDPSSGSWDKSSIQTLFLPFERERILAILLSARRPPDSIYWAWEKNGDYSVRSAYHGIMEYEVFQEVPSSSSMNQNLWPKIWSLEVLPRAKMFLWRVCNNAIPTRVGLHRRINDIQEDCGFCRDRVESTLHVLRECPRAEQIWESSGLEISHISYGPDAREWVEKVMEELDLRERNWFVLVCWAIWGGRNRWLFQGELDSAHELLAFAKKYLEGDPKSKKQLRKDGRALPVIWSPPAPGTTKLNVDAGRIGEQGTCLGIVCRQSDGFPIVAATYNFEENWEISIAEAKAMMLGLQVAYTYGFNEIVVETDNLSVFNALQHGTSGLSPLDLLVEDILDFSSVFSHISWPFVRRNGNNVAHEVAHVLP*

Click here to download the sequence:
Link to NCBI Protein BLAST