Transcript Information: R_Transcript_233203.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99820880221118
Replicate 20.32806719400466
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 10.57388745970106
Replicate 21.0481663363056
Replicate 30.70904728985887
Condition 3: 24 Hour
Replicate 10.71743147586575
Replicate 20
Replicate 31.0259861571983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_233203.p1 GENE.R_Transcript_233203~~R_Transcript_233203.p1 ORF type:internal len:128 (+),score=22.72 R_Transcript_233203:1-381(+)
CGGAAGGACTTCTCTGATCTGGAAATCCAGTTATTGGATATGCATGAATTGTTAGTAGCTGCAGATGTTTCTAATAATGTTGTTGTAGAGCAGTGTAAATGCCATACTGAAGAATTCTTACAGTGTCTCCAAGAGGCTTACAAGCAGAATACCGACCTAGGTACCAGGCTAACCAACTGCCTCGCTAGTGAAGCAAATTACGCTGAGGAGAACTCTAGGTTAGTGGCCGAACTTGATTGTCTAAAATCTGAGTCACAATCATGTCATTCTTTGAACAAAGATCTTGAGCACTCCAACAGTGCCATATCCTTGAAACTGAAAGAGTACAAGAACAGGAGTGAACTTTTGGAGAGTAAGTACCTGAATGCTACAACAGAGCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_233203.p1 GENE.R_Transcript_233203~~R_Transcript_233203.p1 ORF type:internal len:128 (+),score=22.72 R_Transcript_233203:1-381(+)
RKDFSDLEIQLLDMHELLVAADVSNNVVVEQCKCHTEEFLQCLQEAYKQNTDLGTRLTNCLASEANYAEENSRLVAELDCLKSESQSCHSLNKDLEHSNSAISLKLKEYKNRSELLESKYLNATTEH

Click here to download the sequence:
Link to NCBI Protein BLAST