Transcript Information: R_Transcript_23323.p1


Annotated TAIR IDAT1G54510.1
Annotated Gene NameNIMA-related serine/threonine kinase 1
Annotated Gene Symbol(s)ATNEK1, NEK1
Annotation TypeOrtholog
Chromosome Positionchr1:20358603-20362006 | Reverse length=612
E-Value1.4E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.682555924884
Replicate 212.121219483751
Replicate 314.768817660677
Condition 2: 8 Hour
Replicate 110.068201047387
Replicate 211.327551985337
Replicate 315.196002970028
Condition 3: 24 Hour
Replicate 118.917535232039
Replicate 216.468893974214
Replicate 320.627721686829


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23323.p1 GENE.R_Transcript_23323~~R_Transcript_23323.p1 ORF type:complete len:608 (+),score=115.90,Pkinase|PF00069.21|1e-62,Pkinase_Tyr|PF07714.13|1.5e-36,Kinase-like|PF14531.2|2e-06 R_Transcript_23323:476-2299(+)
ATGGAGCAGTATGAGATACTAGAGCAAATCGGAAAGGGTGCCTTTGGTTCAGCGCTTCTTGTCAGGCACAGACTCGAGAAGAAAAAGTATGTTCTAAAGAAGATAAGACTTGCTCGTCAGACTGACAGGACCCGTCGATCTGCTCACCAAGAGATGGAGCTGATTTCGAAGATAAGAAATCCTTTCATTGTGGAGTACAAAGACTCCTGGGTAGAGAGGGGTTGCTATGTCTGCATTATAATTGGTTATTGTGAAGGAGGTGACATGGCAGAGGCCATTAAAAAAGCAAACTGTATTCACTTTCCTGAAGAGAAACTGTGCAAGTGGTTGGTTCAGCTTCTGATGGCACTTGATTACTTGCATCTGAACCATATCCTTCATCGAGATGTTAAGTGTTCGAATATATTTTTGACCAAAGATCAGGACATACGTCTTGGTGACTTTGGTCTTGCCAAATTATTAACTTCAGATGATCTTGCTTCCTCTGTGGTTGGAACTCCTAGTTATATGTGCCCTGAACTTCTTGCTGATATTCCTTACGGCGCAAAGTCTGACATTTGGTCCTTAGGTTGCTGCATCTATGAAATGGCTGCTCTGAGGCCAGCATTCAAGGCATTTGACATGCAGGCACTAATCAATAAAATATATAAGTCAATTGTTTCTCCACTTCCTACCATGTACTCTGGTGGATTTCGTGGCCTTGTTAAGAGCATGCTGAGGAAAAATCCAGAAATGAGACCCAGTGCTGCGGAGCTGCTTAAGCACCCTCATCTTCAGCCTTATGTTTTCAAAATTAATCTGAAGTTTGATAGTCCGAGAAGAAACACTTTCCCAATATCTCATTCTGACTATCCAAAGAAAACTCGATTCCTAGAGGCTGAGATTCCCAAGCTTGTTGACAGAGAGAGAAGGCGATCACCATACAGTAATGACAGAACCCAGAATCCAAGTATATCTGAAGCTGAATTGGACTCCCCCTATTCTTTTAGAAAACAGAAGGCCTTTTCAAGTTATTACTTAAACCAGAGGCTTGAAGAAATGTCTGTCGGCAGTATACATAAGGAGATTGGTGTTGATAAGCCAGTGATTGCCAAGGCATCTACATTTGCCAGAACCCTGAGGTTGTCAACACCTGCAAAAGGTTCTGCTGCTTCGAGGAGACTGTCAACACCTTCAAAGATCCCCACTATTACTTCTAACCGTGTCTCTCATCCTGTTTCAAATACTCCAACCACCAAATCTTCCAGGACAGCACGTAGAGCTTCCCTACCTCTGTCAATCTCAAGCACCAAGACTGCAAACCACGATTCTCGATATAGATCAAATGTCGGTTTCCTTCACAGCGTCGAATCCCCTGATATATCTGTCAACGCCCCACGTATTGATAAAATGGTGGAATTCCCATTAGCATCTTCCGAGGAACCCCTTTACCCTGCTCATAGAACTTCATCAACCTCTGCTCAGTGCTCTTCCACTTCACCAAATGTTGGTGACCGTTCAATCACAAAGGACAAGTGTACGGTCCAGATTGTAGGCAAACCCTTGGCCAAGCCAATTGCAGTCAGTGAATCCTCAGAGCACAATCAAGTCAGTGGTGTTTCCAGTCGGTCGTCCTCAGACTCCCACCAACGCCGTTTTGATACTAAATCATATCAGCAACGTGCTGAGGCATTGGAAGGCTTGCTGGAATTCAGTGCCCGACTTCTGCAGCAGGAGAGATATGATGAGCTCGGTGTGCTGTTAAAGCCCTTCGGCCCTGAGAAGGTGTCTCCAAGAGAAACAGCTATTTGGTTAGCCAAAAGCTTCAAAGAGACCGGAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23323.p1 GENE.R_Transcript_23323~~R_Transcript_23323.p1 ORF type:complete len:608 (+),score=115.90,Pkinase|PF00069.21|1e-62,Pkinase_Tyr|PF07714.13|1.5e-36,Kinase-like|PF14531.2|2e-06 R_Transcript_23323:476-2299(+)
MEQYEILEQIGKGAFGSALLVRHRLEKKKYVLKKIRLARQTDRTRRSAHQEMELISKIRNPFIVEYKDSWVERGCYVCIIIGYCEGGDMAEAIKKANCIHFPEEKLCKWLVQLLMALDYLHLNHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGAKSDIWSLGCCIYEMAALRPAFKAFDMQALINKIYKSIVSPLPTMYSGGFRGLVKSMLRKNPEMRPSAAELLKHPHLQPYVFKINLKFDSPRRNTFPISHSDYPKKTRFLEAEIPKLVDRERRRSPYSNDRTQNPSISEAELDSPYSFRKQKAFSSYYLNQRLEEMSVGSIHKEIGVDKPVIAKASTFARTLRLSTPAKGSAASRRLSTPSKIPTITSNRVSHPVSNTPTTKSSRTARRASLPLSISSTKTANHDSRYRSNVGFLHSVESPDISVNAPRIDKMVEFPLASSEEPLYPAHRTSSTSAQCSSTSPNVGDRSITKDKCTVQIVGKPLAKPIAVSESSEHNQVSGVSSRSSSDSHQRRFDTKSYQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLAKSFKETGA*

Click here to download the sequence:
Link to NCBI Protein BLAST