Transcript Information: R_Transcript_233320.p1


Annotated TAIR IDAT5G17210.1
Annotated Gene NameProtein of unknown function (DUF1218)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5656519-5657970 | Forward length=209
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 193.954714809026
Replicate 291.610173921637
Replicate 387.76897352631
Condition 2: 8 Hour
Replicate 125.259102787685
Replicate 216.4764392514
Replicate 318.151610620387
Condition 3: 24 Hour
Replicate 148.211395178179
Replicate 251.539657617981
Replicate 349.765728551261


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_233320.p1 GENE.R_Transcript_233320~~R_Transcript_233320.p1 ORF type:complete len:190 (+),score=13.56,DUF1218|PF06749.8|5.4,DUF1218|PF06749.8|3.9e-21 R_Transcript_233320:69-638(+)
ATGGCAGGAAAAGCGATTACGATTTCTATTCTTGTGGTTGTTATTGGTCTAATCGCTGTTGTTCTTGGTTTTGTTGGTGAGAGCACCAGGATTAAGACAGCAGAGATCACAGATGCAGGGGAATGTGTGTATCAAACAAGTGCATCATTCGCATTAGGAATAGTAGCTGCAATCATTCTTTTGGTTGAGCAGATCCTTGTTAGTGGTGCGACTGGCTGCTTCTGTTGCACCGGAAAAGGCTGTCCTTCTAGTTTCCGTGGCATTGCTGGAATTGTCTGCTTTGTTTTCTCCTGGCTAATATTTGTAGGAGCATTTGCGGTCTTGATATATGCGGCCATCCTGAACAATGCTCATGTGATGTCGAAATCGTTCACAAGCGAAGATGATTGTCCCATAGCCAAATCCGGGCTCTTCATTGTGGCTGGCGTGCTGTCTATTGTGAGCTTATTCCTTGGCCTCATTTCTTACATTGTCTTGACTTTGGGCGAAAAGAAGACGACTTCAAGGGCGCCTAACCTTGCTAACGAGCATGGCGTTGCCACAGCACAACCACAAATCCCACCTAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_233320.p1 GENE.R_Transcript_233320~~R_Transcript_233320.p1 ORF type:complete len:190 (+),score=13.56,DUF1218|PF06749.8|5.4,DUF1218|PF06749.8|3.9e-21 R_Transcript_233320:69-638(+)
MAGKAITISILVVVIGLIAVVLGFVGESTRIKTAEITDAGECVYQTSASFALGIVAAIILLVEQILVSGATGCFCCTGKGCPSSFRGIAGIVCFVFSWLIFVGAFAVLIYAAILNNAHVMSKSFTSEDDCPIAKSGLFIVAGVLSIVSLFLGLISYIVLTLGEKKTTSRAPNLANEHGVATAQPQIPPK*

Click here to download the sequence:
Link to NCBI Protein BLAST