Transcript Information: R_Transcript_233624.p1


Annotated TAIR IDAT5G58100.1
Annotated Gene Nameunknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23507828-23514863 | Forward length=945
E-Value2.1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57640929330691
Replicate 20.22101368859261
Replicate 31.2056177682186
Condition 2: 8 Hour
Replicate 11.0309837872524
Replicate 22.3537770359143
Replicate 31.5285566838221
Condition 3: 24 Hour
Replicate 11.6916279009887
Replicate 21.6251243393057
Replicate 31.8431751315282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_233624.p1 GENE.R_Transcript_233624~~R_Transcript_233624.p1 ORF type:internal len:95 (+),score=23.03 R_Transcript_233624:1-282(+)
GAAACTGATATGATAGAATGGTCTAATTCATGTTTAGAAGCTCTACATAATATTGAGAAGTTATATGAAGGAAAGGACACAAATTACATCATTCAGAGCAAAGCTCTACAGCTGTTGAATGGGAGGAGTGGAGATCTAAAAGTTACTTTTGGAAAGGAGCTGAAATCTGGGGACCTAGGTGGCCTTCATGCTGAATGTTTGACAGATACATGGATAGGAAAAGACAGGTGGGCATTTATTGATCTAAGTGCTGGCCCTTTTACATGGGGTCCTGCTGTTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_233624.p1 GENE.R_Transcript_233624~~R_Transcript_233624.p1 ORF type:internal len:95 (+),score=23.03 R_Transcript_233624:1-282(+)
ETDMIEWSNSCLEALHNIEKLYEGKDTNYIIQSKALQLLNGRSGDLKVTFGKELKSGDLGGLHAECLTDTWIGKDRWAFIDLSAGPFTWGPAVG

Click here to download the sequence:
Link to NCBI Protein BLAST