Transcript Information: R_Transcript_233910.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1699324211903
Replicate 21.1746182051076
Replicate 33.0435525477405
Condition 2: 8 Hour
Replicate 11.1986087736414
Replicate 22.3455470462782
Replicate 32.4117524600514
Condition 3: 24 Hour
Replicate 11.6054410648744
Replicate 21.3880932168895
Replicate 30.76530435968172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_233910.p1 GENE.R_Transcript_233910~~R_Transcript_233910.p1 ORF type:internal len:143 (+),score=16.30,rve|PF00665.22|5.9e-26 R_Transcript_233910:2-427(+)
TATGGCAAGCAAAAGAGAGTAAGCTTCTCACCGGGTACACATAGAACCAAGGCAACTCTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGTCACCGCCGCAGGTAATCGCTATATGATGACTATTATTGATGATTACTCACGAAAAGTCTGGGTATATTTCTTGAAACATAAAAATGAGGCCCTAGACAAATTCAAAGAGTGGAAAACCTTAATTGAGAATCAGACCGGGAAAAAGCTTAAGAGGTTAAGGACCGATAATGGCCTTGAATTTTGTGATAATGAATTTAAGGAATTTTGCAAGAAGGAAGGTGTTGCTAGGCACCTCACTATTGTTGGCAAGCCACAACAAAATGGCGTTGCCGAAAGAATGAACCGAACTATCATGGAGAAGGTTCGTTGTATGCTCTCTACTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_233910.p1 GENE.R_Transcript_233910~~R_Transcript_233910.p1 ORF type:internal len:143 (+),score=16.30,rve|PF00665.22|5.9e-26 R_Transcript_233910:2-427(+)
YGKQKRVSFSPGTHRTKATLDYVHSDLWGPSQVVTAAGNRYMMTIIDDYSRKVWVYFLKHKNEALDKFKEWKTLIENQTGKKLKRLRTDNGLEFCDNEFKEFCKKEGVARHLTIVGKPQQNGVAERMNRTIMEKVRCMLSTA

Click here to download the sequence:
Link to NCBI Protein BLAST