Transcript Information: R_Transcript_23418.p1


Annotated TAIR IDAT1G29980.1
Annotated Gene NameProtein of unknown function, DUF642
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10503411-10505994 | Reverse length=407
E-Value7.8E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.872322296674
Replicate 219.758527247652
Replicate 321.406296268893
Condition 2: 8 Hour
Replicate 116.519939451307
Replicate 215.672146443276
Replicate 315.298082313252
Condition 3: 24 Hour
Replicate 125.163360760497
Replicate 222.633125935745
Replicate 331.923551814077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23418.p1 GENE.R_Transcript_23418~~R_Transcript_23418.p1 ORF type:5prime_partial len:458 (+),score=73.57,DUF642|PF04862.8|1.4e-62,DUF642|PF04862.8|1.8e-17,CBM_4_9|PF02018.13|2.6e-05,CBM_4_9|PF02018.13|3.2 R_Transcript_23418:1-1374(+)
AGGACACTTTTTTTTAGTAGCTGTCTTTCTGCCGCACTCTTCAGTCCTCAGTTCTCACTCTCACTCCCCCACTTGAGCATCTCCCTTCTTCTGTTGTCACTGGACGCACAGAAAGAGAAAGATAAAAGAAAAAGAAAAACAGAGCAGAGAGTGTTAATAATGGCAAAGAGAACAGAAATTAGAAGAATAACCCAAACCCAATGTTTGGCTTTAGTAGTTTCTATGGTGCTTTTCTTTGCTACTCAAAATCTGGCTTCACCTATTGAAGATGGTATGTTGGTAAATGGAGATTTTGAGACGCCTCCATCAGGAGGGTTTGCAAGCACAAACGAGGGACTAGGGGACGGGCCCACCACAATTCCAGGTTGGCAAACAAACGGCACTGTAGAGCTAGTGTCATCAGGGCAAAAGCAAGGGGCAATGATCCTAATAATCCCAGGAGGAACACACGCCGTCCGATTAGGAAACGATGCCCAGATCAGCCAAGATCTAACGGTGGAAAAAGGGTCGGTGTACGCAGTCACATTTAGTGCCGCCCGCACCTGTGCACAACTGGAGTCTCTGAACGTTTCTGTGGGGCCCTCGCAAGCATCCTCAACCATTGATCTTCAAACAGTGTATACTGATCAAGGGTGGGATTCTTATGCTTGGGCTTTTGAGGCTGATCAAGAGGATGTAAAGTTGATGCTGAAGAATCCGGGTATGGAGGAGGACCCCACTTGTGGGCCCATCATTGATGATGTTGCTATTAAGAAGATGTTTACTCCTGATAGGGCCAAAGAAAATGTAGTGCTCAATGGGGACTTTGAAGAAGGACCATGGCTGTTCTGGAATGACTCCCTTGGCCTCTTACTTCCCACCAATCTCGACGAGGAAACAACGCCATTACCAGGCTGGATAGTCGAATCAAATCGAGCTGTTCGATACGTTGATTCATACCATTTCGATGTGCCACAAGAGAAGAGAGCCGTTGAGCTTCTTTCAGGGAAAGAAGGGATCATATCCCAAATGGTTCAGACCACACCAAAGAAAGAATACACCCTAAGTTTTTCAATGGGCATGGGAGGGGACAAGTGCAGGGAGCCCTTAGCCATCATGGCCTTTGCTGGTGACCAGGCTCAAAACTTCCACTACATAAGAGACTCAAATTCCACATCCCAAAGGGAGGCTCTCAATTTCACGGCCAAGGCTGACCGCACCCGAATTGCGTTTTACAGTGTGTACTACAACACTAGGAGTGATCATATGAGCTCTCTTTGTGGTCCTGTGTTGGATGATGTTAAGGTGTGGGGAGCTTCTGGCTCTTCTATGATTAAGCTTGGGGTGTTTAGTTTGGGCCTTTGGGTTGTAGCTTTGGCCTTGATTTTGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23418.p1 GENE.R_Transcript_23418~~R_Transcript_23418.p1 ORF type:5prime_partial len:458 (+),score=73.57,DUF642|PF04862.8|1.4e-62,DUF642|PF04862.8|1.8e-17,CBM_4_9|PF02018.13|2.6e-05,CBM_4_9|PF02018.13|3.2 R_Transcript_23418:1-1374(+)
RTLFFSSCLSAALFSPQFSLSLPHLSISLLLLSLDAQKEKDKRKRKTEQRVLIMAKRTEIRRITQTQCLALVVSMVLFFATQNLASPIEDGMLVNGDFETPPSGGFASTNEGLGDGPTTIPGWQTNGTVELVSSGQKQGAMILIIPGGTHAVRLGNDAQISQDLTVEKGSVYAVTFSAARTCAQLESLNVSVGPSQASSTIDLQTVYTDQGWDSYAWAFEADQEDVKLMLKNPGMEEDPTCGPIIDDVAIKKMFTPDRAKENVVLNGDFEEGPWLFWNDSLGLLLPTNLDEETTPLPGWIVESNRAVRYVDSYHFDVPQEKRAVELLSGKEGIISQMVQTTPKKEYTLSFSMGMGGDKCREPLAIMAFAGDQAQNFHYIRDSNSTSQREALNFTAKADRTRIAFYSVYYNTRSDHMSSLCGPVLDDVKVWGASGSSMIKLGVFSLGLWVVALALILV*

Click here to download the sequence:
Link to NCBI Protein BLAST