Transcript Information: R_Transcript_234360.p1


Annotated TAIR IDAT5G47850.1
Annotated Gene NameCRINKLY4 related 4
Annotated Gene Symbol(s)CCR4
Annotation TypeOrtholog
Chromosome Positionchr5:19378803-19381058 | Reverse length=751
E-Value3.6E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98411342759716
Replicate 20.51210488820239
Replicate 30.9115646540189
Condition 2: 8 Hour
Replicate 10.69151351584004
Replicate 21.0907747239603
Replicate 31.6310818272492
Condition 3: 24 Hour
Replicate 10.82518434194572
Replicate 21.1891153702237
Replicate 31.0395957296729


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234360.p1 GENE.R_Transcript_234360~~R_Transcript_234360.p1 ORF type:complete len:779 (+),score=90.73,Pkinase|PF00069.21|9.9e-43,Pkinase_Tyr|PF07714.13|1.3e-41,RCC1_2|PF13540.2|1.3,RCC1_2|PF13540.2|6.4,RCC1_2|PF13540.2|0.00027,RCC1_2|PF13540.2|0.014,RCC1_2|PF13540.2|4.2,RCC1_2|PF13540.2|8.6e+03 R_Transcript_234360:246-2582(+)
ATGGCTTTCCTACCACAAATTTTCATCCTTCTAGCCTTTTTTTCTTTCCTCTCTTTTCCCCCTCAAACCCATTCCCTTTCTACTGTTTCTATCTCCTATACTTCCAACCAAACACTAGTTTGTGCATTAATACCTTCATCAACAAACTACCAGTCATCTCTCAATTGCACTACTTTCCCAAGTTTAATTCAAATCCCCATTAAACCCCCAAATGTATCATACAGCAGATTAGTGGGTGGGAATGGGTTCCTTTGTGCGGTGAGATCTCAGTCTCTTTCATTCTCCATTTCAGTCATGGAATGCTGGAGATTCTCAGCTAATGGTGCAAACATTTTACATAAAAGAATATACAGGGGCCCAGTTTTGGGTGAACTTGAAGCTGGTAATTCTCATGTTTGTGGGCTTGAAAATGGGACTAATAGCCTCAAGTGCTGGCAGTGGAGTCAATGGAATCCAAATAAAGTTTCACATTTTTCCAGCATCGCTGTTGGTCAGGAATTTGTTTGTGGGTTAGATATTAATGGCAAAATTGATTGTTTGGGCAATGATGCTAGTGTTGTTACTGGGAAGAAACCCATTGGAAATTATAGTGTTATTGCAGCTGGGTCACATCATGCTTGTGCTATATCCTTGAATGGTAGTTTGGATTGTTGGGGAAGTAGTAAAGTGATAGGAAACAAACCAGATGGAGAGTTCATAGATTTAGCCTTGGGAGACAACAAAAGTTGCGGGATACGGGTTAATAAAACAGTAGTTTGTTGGGGGGATGACAATTTTAGAATACCCACAAGGTTGCAGGAGACTCAGTTCACAGGAATTGTAGCCAAACAAGGAATTTTTTGTGGGGTTCTTTCATCCAATTATTCAGTATTGTGTTGGGGGAATGATATCCTAGATGGGAATTTGGTTGTTTTCAGTAATGTGATGCCAGGAACTTGCACTACTCAATGCCCATCGTCACGGTGTGCTTTACCAGGGTATGGTCAGTTTTGTGGTCAAGGACTAATGTTGTGCCAGCCCTGTGCTGGGCAAATAATGGTTCAAGGAGCACCGTCATCAGCAAGTCCATCTTTGGCTCCATTGTTGCAGCCTTCAGGGAATAGCAAAACATGGAGTGCTAAAATGGTGGTTTTGTTGGTAATAGGATGCTTAGGGTCTGTTTCTTTGATAGCATCAATAGCCTTCTTTGTGTGCCGGTGTCCCGGAAGTAAGGGGAGTAGCCGAGTGCATGATTCAGGGCCTATGGAGCTGGGTGAGAATCCTCAAGGAACGCGAATTGAAGTAGACAATCAACCACAGCCAGTAGCAACACCTAAGCTACAGAAGCGGTTGAGCCACATGTATAGTATAGGGAATGGAGGCAGTCTAGAGGAGTTTGCATTGGAAGTCCTAATCAAAGTCACCAACAACTTCTCGGAGGAGCAAAGGATAGGAATAGGCAGTTTTGGGTCAGTCTATCATGCCACATTACAAGACGGGAGAGAGGTGGCAATCAAGCGAGCAGAAGTTCACGTATCACCAAATAGGGTGGGAATAAGGCGCCGCCAAGAGGAGAAGGATACAGCATTCATGGCAGAACTAGAGTTTTTATCAAGGCTTAACCACAAGCACCTCGTGAGATTGATTGGCTTTTACGAGGACGCAAATGAAAGGATTCTAGTGTACGAGTTCATGAACAATGGAACCCTTCACGACCACCTTCACAAGCTAAAGGGATCTTCTCCTCTCGCAACATGGCCAGCTCGGCTCAAGGTGGCGTTAGATGCAGCTAGGGGGATCCAGTACCTACATGAATTTGCAGTGCCCCCTATCATACATCGAGATATCAAACCTTCAAATATATTGCTTGACGATGATTGGACAGCCAAGGTGTCGGATTTTGGGTTGTCCTTGATGGGTCCCCAGGAAGGGGAGACCCATATATCCCTTTGGGCCGCGGGCACATTTGGATACGTAGATCCTGAGTATTACAGACTACACCGGTTAACAACAAAGAGCGATGTTTATAGCTTTGGTGTCGTACTAATGGAGCTTCTAAGCGGGCACAAGGCCATCCACACCAACGAGGAAGGACTGCCAAGAAACGTGGTTGATTTTCTGGTGCCATATATTACAAGAGACGAAATCCATAGAGTGTTGGACCCATATGTGCCACCTCCAACTCCGATAGAGATAGAGGCAGTAGCTTATTTGGGGTACCTAGCTGTAGATTGCGTGAGCCTAGAAGGTCGAAACCGGCCTTCCATGTCTGAGGTTGTTAGTTGTTTGGAAAGAGCATTGGCAGCCTGCTACGCATTACCAGCTATGTCGCGCTCCTCGACTGAGTCCTCTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234360.p1 GENE.R_Transcript_234360~~R_Transcript_234360.p1 ORF type:complete len:779 (+),score=90.73,Pkinase|PF00069.21|9.9e-43,Pkinase_Tyr|PF07714.13|1.3e-41,RCC1_2|PF13540.2|1.3,RCC1_2|PF13540.2|6.4,RCC1_2|PF13540.2|0.00027,RCC1_2|PF13540.2|0.014,RCC1_2|PF13540.2|4.2,RCC1_2|PF13540.2|8.6e+03 R_Transcript_234360:246-2582(+)
MAFLPQIFILLAFFSFLSFPPQTHSLSTVSISYTSNQTLVCALIPSSTNYQSSLNCTTFPSLIQIPIKPPNVSYSRLVGGNGFLCAVRSQSLSFSISVMECWRFSANGANILHKRIYRGPVLGELEAGNSHVCGLENGTNSLKCWQWSQWNPNKVSHFSSIAVGQEFVCGLDINGKIDCLGNDASVVTGKKPIGNYSVIAAGSHHACAISLNGSLDCWGSSKVIGNKPDGEFIDLALGDNKSCGIRVNKTVVCWGDDNFRIPTRLQETQFTGIVAKQGIFCGVLSSNYSVLCWGNDILDGNLVVFSNVMPGTCTTQCPSSRCALPGYGQFCGQGLMLCQPCAGQIMVQGAPSSASPSLAPLLQPSGNSKTWSAKMVVLLVIGCLGSVSLIASIAFFVCRCPGSKGSSRVHDSGPMELGENPQGTRIEVDNQPQPVATPKLQKRLSHMYSIGNGGSLEEFALEVLIKVTNNFSEEQRIGIGSFGSVYHATLQDGREVAIKRAEVHVSPNRVGIRRRQEEKDTAFMAELEFLSRLNHKHLVRLIGFYEDANERILVYEFMNNGTLHDHLHKLKGSSPLATWPARLKVALDAARGIQYLHEFAVPPIIHRDIKPSNILLDDDWTAKVSDFGLSLMGPQEGETHISLWAAGTFGYVDPEYYRLHRLTTKSDVYSFGVVLMELLSGHKAIHTNEEGLPRNVVDFLVPYITRDEIHRVLDPYVPPPTPIEIEAVAYLGYLAVDCVSLEGRNRPSMSEVVSCLERALAACYALPAMSRSSTESSR*

Click here to download the sequence:
Link to NCBI Protein BLAST