Transcript Information: R_Transcript_234438.p1


Annotated TAIR IDAT2G37320.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15667223-15668725 | Forward length=500
E-Value1.7E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7544435668122
Replicate 20.81501350968994
Replicate 31.1855612803924
Condition 2: 8 Hour
Replicate 11.1315094707599
Replicate 21.5293024549425
Replicate 32.2144293917663
Condition 3: 24 Hour
Replicate 11.8247425338101
Replicate 21.1007245657035
Replicate 31.6183145794379


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234438.p1 GENE.R_Transcript_234438~~R_Transcript_234438.p1 ORF type:complete len:541 (+),score=84.52,PPR_2|PF13041.2|0.0043,PPR_2|PF13041.2|3.5e-12,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|0.74,PPR_2|PF13041.2|2e+03,PPR|PF01535.16|0.00015,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.28,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|3.1e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|35,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|1.5e+03,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|11,PPR_3|PF13812.2|29,PPR_3|PF13812.2|3e+02 R_Transcript_234438:383-2005(+)
ATGAGCTTCAGGAATCTTCCTGGATGCTACCTGAGTAAAGGGAAAACCCTTAAATTCATAACATGCTTGCCCATTTTACAAGCGTTGCTTCATCTCAAGGCCTTTTCTACGCATAGACTTGAACGAAGCAATGAACTCAAAAGTTTAAATAAGGCACTAAGAGTTATTGACCTTGTATCACCAAAGCCTGCTCGCACTAACAACCTTGAAAGCCATCTCCAACTTATTCAAGACTTCCTACAAGCTCGCTCTAAGCATGCTATTGAAGACAACTCTGGCAATGGTTTGACTTTCTCAGGTTCCAAAAGCCAAAATCAAATTGATCGAAAGCAGTTATATTTCCCTGTCAAGATTGTGAATCCAATTTTAGGTGTTTCTGAACTGCATAGAAACGGGTTGCCAATTGATGTTGTATTGCTTTCAGGCGCATTGAGTTCTTGCAGGTGTAGAGGGAAACTTTACAATGAAACTCAGCTTCAATGTTTAGCTATTAAAGGTGGATATTTTGTGAATGTTTATATTGGAACTTCTTTGATTAGCATCTACTCAAAATATGGGGATCTACGTTCTGCTTTAAAGGTATTTGAGGAAATGCCTTTCAGAAATGTCGTATCATGGACTGCTCTTATTTCTGGTTTTTCTCAGGAATGCCAAGTTGATGTCTGTTTGGAGCTTTACAATCAAATGACCAATTCAGGTCTCAAACCCAATGGATTTACGCTAACAAGTCTCTTGAGTGCCTGTGTGGGTAGTGGCTTTCTGATACAAGGGAGAAGTGCTCATTGTCAAGCTATTTTATGGGGTTTTGATTCATATATTAATGTTGCAAACACACTAATCACAATGTATTGCAAGTGTGGGAACGTTGAAGATGCATTCTCTATATTTGAAACAATGCATGCCAAAGACCTCGTTTCATGGAACTCGATGATTGCAGGGTATGCATTGCATGGACTAGCAGTGCAGGCAATTGATCTCTTTGAGAAGATGAGAAAACTAAAGATCAAGCCAGACGGTATTACTTTCCTAGCTGTTCTCTCATCATGCCGTCATGCTGGTCTTGTTAATCAAGGACGGTTTTATTTCAATTCGATGCTAGAAAGTGGGGTGGCACCCAATGTGGGTCATTATTCATGCATCGTGGATCTTCTTGGCCGAGCTGGATTGGTGGAAGAGGCTCGGAATTTTATTCTGGATATGCCGATACAACCCAATGCAATTATATGGGGCTCACTTCTTTCTTCTTGTAGGCTTCATGATAATGTTTGGATTGGAATAGAGGCTGCTGAAAACAGGCTTGCACTGGAACCATCTTGTGCTGCCACCCATGTGCAGCTCACAAAGTTGTATGCAAGAGTGGGATTTTGGGACCAGGTAGCAAGAGTAAGGAAGTTGATGAAGGACACTGAGGTGAAAACAAACCCTGGGTATAGCTGGATTGAGATAGGAAATGAAATCTACAGGTTTAGCGTGAATGACACTTCAAACTCCAGGACAAATGAGATTCTCTTTATTTTAGAGGGTCTGATGGGTCAATTGGCAGTATCTGATGATGTGCCAGAATTATTTGAAGAGATTGGTGATGATTCACGAACCAGTTTTATTATGACAAAACAAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234438.p1 GENE.R_Transcript_234438~~R_Transcript_234438.p1 ORF type:complete len:541 (+),score=84.52,PPR_2|PF13041.2|0.0043,PPR_2|PF13041.2|3.5e-12,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|0.74,PPR_2|PF13041.2|2e+03,PPR|PF01535.16|0.00015,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.28,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|3.1e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|35,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00097,PPR_1|PF12854.3|1.5e+03,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|11,PPR_3|PF13812.2|29,PPR_3|PF13812.2|3e+02 R_Transcript_234438:383-2005(+)
MSFRNLPGCYLSKGKTLKFITCLPILQALLHLKAFSTHRLERSNELKSLNKALRVIDLVSPKPARTNNLESHLQLIQDFLQARSKHAIEDNSGNGLTFSGSKSQNQIDRKQLYFPVKIVNPILGVSELHRNGLPIDVVLLSGALSSCRCRGKLYNETQLQCLAIKGGYFVNVYIGTSLISIYSKYGDLRSALKVFEEMPFRNVVSWTALISGFSQECQVDVCLELYNQMTNSGLKPNGFTLTSLLSACVGSGFLIQGRSAHCQAILWGFDSYINVANTLITMYCKCGNVEDAFSIFETMHAKDLVSWNSMIAGYALHGLAVQAIDLFEKMRKLKIKPDGITFLAVLSSCRHAGLVNQGRFYFNSMLESGVAPNVGHYSCIVDLLGRAGLVEEARNFILDMPIQPNAIIWGSLLSSCRLHDNVWIGIEAAENRLALEPSCAATHVQLTKLYARVGFWDQVARVRKLMKDTEVKTNPGYSWIEIGNEIYRFSVNDTSNSRTNEILFILEGLMGQLAVSDDVPELFEEIGDDSRTSFIMTKQM*

Click here to download the sequence:
Link to NCBI Protein BLAST