Transcript Information: R_Transcript_234447.p1


Annotated TAIR IDAT2G31160.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH3
Annotation TypeOrtholog
Chromosome Positionchr2:13277903-13278562 | Forward length=219
E-Value3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1713836832171
Replicate 25.981504188364
Replicate 35.0607908642662
Condition 2: 8 Hour
Replicate 16.8332646364405
Replicate 28.4503332539364
Replicate 35.0655657545266
Condition 3: 24 Hour
Replicate 15.4725005600923
Replicate 24.1033039796423
Replicate 33.1813524254211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234447.p1 GENE.R_Transcript_234447~~R_Transcript_234447.p1 ORF type:5prime_partial len:172 (-),score=18.48,DUF640|PF04852.8|1.3e-63 R_Transcript_234447:39-554(-)
AACTCACTAACAATCCCCCAAGAAATTACTACTACAAATCCCACAAACTCCATAACAACACAACCTTCACCATCATCATCATCAAGCAGCAGGTATGAGAACCAGAAAAGAAGAGACTGGAATACCTTTGGCCAATATCTAAAGAACCACAGGCCCCCACTGAGTTTGAACAGGTGCAGTGGGGCCCACGTCCTGGAATTCCTTCGTTACTTAGACCAGTTTGGCAAAACCAAAGTCCATACCCAAATCTGCCCCTTCTACGGGCACCCGAACCCGCCTGCCACCTGCCCGTGCCCGTTGAGGCAAGCTTGGGGCTCCCTTGATGCTTTGATCGGACGGCTTAGAGCCGCCTTTGAGGAGAATGGTGGTAAGCCCGAACAGAACCCGTTTGGGGCCCGGGCTGTGAGGCTCTACCTTAGGGAAGTCAGGGATTTGCAGTCTAAGGCTAGGGGGATTAGCTATGAGAAGAAGAAGCGTAAGAGAGTTCCTCAACAACAACAAGCTCATGCTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234447.p1 GENE.R_Transcript_234447~~R_Transcript_234447.p1 ORF type:5prime_partial len:172 (-),score=18.48,DUF640|PF04852.8|1.3e-63 R_Transcript_234447:39-554(-)
NSLTIPQEITTTNPTNSITTQPSPSSSSSSRYENQKRRDWNTFGQYLKNHRPPLSLNRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPATCPCPLRQAWGSLDALIGRLRAAFEENGGKPEQNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRVPQQQQAHAN*

Click here to download the sequence:
Link to NCBI Protein BLAST