Transcript Information: R_Transcript_234640.p1


Annotated TAIR IDAT5G40400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16166444-16168276 | Forward length=610
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2079165337681
Replicate 20.15438456188454
Replicate 30
Condition 2: 8 Hour
Replicate 10.72017249844839
Replicate 20.32883649766449
Replicate 30.66733862574952
Condition 3: 24 Hour
Replicate 10.67522962434424
Replicate 20.32434204250849
Replicate 31.6093900505072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234640.p1 GENE.R_Transcript_234640~~R_Transcript_234640.p1 ORF type:3prime_partial len:136 (+),score=8.07 R_Transcript_234640:83-487(+)
ATGCTCATGAATCGAATTTCTTCATTTTCTGCAACTCATTCTATTCACCCAAAATCTCAATCAAAATCCATACTTTTTAATCTGTTTTGTTCTTCATATTCATCTTCAACATCCCTCACTATCACTGATAATTACCCTACAACAACCACAAACATCTCAAACCCGCTTTACAATTTTCTTCCACAAACCCAAAACCCCAACAATTTAGTCAATCTAATCTCCTCATCTCTCAAAAAACCCAACTCAAAATCACATCTTTTTCACTTGGGTCAACAATTAAATGACCTTATTTCTCACTTAAACACTCAACATATATCACGGATTTTGCTTAGATGCCAATGTGAGCCTCACTCTGCTCTCACTTTCTTCAACTGGGTTAAAAATGATCTGGGTATTATTCCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234640.p1 GENE.R_Transcript_234640~~R_Transcript_234640.p1 ORF type:3prime_partial len:136 (+),score=8.07 R_Transcript_234640:83-487(+)
MLMNRISSFSATHSIHPKSQSKSILFNLFCSSYSSSTSLTITDNYPTTTTNISNPLYNFLPQTQNPNNLVNLISSSLKKPNSKSHLFHLGQQLNDLISHLNTQHISRILLRCQCEPHSALTFFNWVKNDLGIIPT

Click here to download the sequence:
Link to NCBI Protein BLAST