Transcript Information: R_Transcript_23469.p1


Annotated TAIR IDAT1G18260.1
Annotated Gene NameHCP-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6279047-6282008 | Reverse length=678
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.560059773646
Replicate 234.540305692202
Replicate 348.208730522683
Condition 2: 8 Hour
Replicate 139.199020909655
Replicate 249.990896369543
Replicate 363.811332180948
Condition 3: 24 Hour
Replicate 156.058975528032
Replicate 254.05000116925
Replicate 359.151602504354


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23469.p1 GENE.R_Transcript_23469~~R_Transcript_23469.p1 ORF type:complete len:679 (+),score=129.37,Sel1|PF08238.8|8.1,Sel1|PF08238.8|7.9e+03,Sel1|PF08238.8|3.1e-08,Sel1|PF08238.8|6.9e-06,Sel1|PF08238.8|4.2e-05,Sel1|PF08238.8|0.00018,Sel1|PF08238.8|4.5,Sel1|PF08238.8|44,Sel1|PF08238.8|0.45,Sel1|PF08238.8|7.5e-05,TPR_11|PF13414.2|36,TPR_11|PF13414.2|88,TPR_11|PF13414.2|75,TPR_11|PF13414.2|0.01,TPR_11|PF13414.2|67,TPR_11|PF13414.2|0.0025,TPR_11|PF13414.2|0.0087 R_Transcript_23469:173-2209(+)
ATGCGGCACCGGCGTATACTGGTCCACAAGTATTTGATCATCCTCATCACATTCTCTCTCCTACCACTCCATTCTCTCTCCCGCTCATTCGTCCTCGTTCTCTCTCAAGACGATCTACGAGACACCATCAACCCTAACCCCAACTCTCCCCCTTCCGAGGAACCAAATTCCGATTCTGAATCGTCCGAGTGGGACGAGTTCGGCGACGCCGATTCCAGGTTTGAAGAGGAACTTGACCCTGGATCATGGCGCCCCGTGTTCGAACCCGATGGAAATCGAAATCTGGAGGAAGAGTCGTTATATTATTCTGGAGTCTACAAGATGATTTCGGCAGCTAGTGCTGGAGAGCCGAGGCTTATGGAGGAAGCAGCGGTAGAGATCGAAGCAGCCGCCAAGGGAGGTGACTCTAATGCGAGGTCCGTGTTAGGGTTTTTGTACCAGATGGGGATTGTGCGAGAAACCGATAAAGCTAAGGCCATTTTGTATCATCATTTTGCTGCCCAAGGTGGGAATTTGCAGTCTAAGATGGCTCTTGCTCATATTTATGCTAGACAAGATATGCATGAGAAAGCAGTTAAATTGTATAGTGAACTCGCTGAAGTTGCTGTAAATAGTTTCTTGATTTCTAAAGATTCACCTGTGATTGAGCCAGTAAGAATTCATGTCGGAGCTGAGGAAAATAAGGAAGCTTTGAGGAAGTCTCGAGGGGAAGATGATGAAGATTTTCAAATATTGGAGTACCAAGCACAAAAGGGCAATGCTGGGGCAATGTATAAGATTGGAATTTTCTATTATTTTGGACTCAGAGGGCTCCGACGTGATCCTTCCAAGGCATTGTCATGGTTCTTGAAAGCAGTCGAGAAAGGGGAGCCTAGGTCCATGGAGCTTCTAGGGGAGATATACGTGAGAGGTGCAGGAGTTGAGAGGAATTATACAAAAGCCCTTGAATGGCTTACTCTTGCAGCTAAACAACATCTGTACTCAGCTTATAATGGCATTGGATACTTATATGTTAAAGGCTATGGGGTTGAGAAAAAGAATCACACGAAAGCAAAGGAGTTTTTTGAAAAAGCTGCTGATAATGAGGACCCAGGTGGCTACTATAATCTTGGGGTCTTATATCTCAAAGGGATTGGAGTCAATAAGGATGTGAAGCTGGCTTGTAGATATTTTATATTGGCTTCTAATGCTGGTCAACCGAAGGCCTTCTATCAACTAGCAAAAATGTTTCACACTGGTGTTGGCCTGAAGAAGAATCTTCATATGGCCACTGCGTTGTACAAATTAGTTGCAGAACGAGGACCATGGAATTCCTTGTCTAGGTGGGCATTAGAGGCCTACCTAAAGGGTGATGTAGGTAAAGCATTACTGTTGTATTCTAGGATGGCAGAACTGGGTTATGAGGTGGCACAAAGTAATGCTGCATGGATTCTTGATAAATATGGAGAGCGTAGTATGTGCATTGGAGCATCTGGGTTCTGTACAGATGTTGAGAGGCATCAAAGGGCACATTTATTATGGTGGCAGGCTTCTGAGCAGGGTAATGAGCACGCAGCTTTGTTGATAGGGGATGCATATTACTATGGAAGGGGTACTGACAGAGATTATGAACGTGCTGCTGAGGCATATATGCATGCAAAGTCACAGTCTAATGCTCAAGCCATGTTCAATCTTGGGTATATGCATGAACATGGACAAGGACTTCCTTTTGATCTTCATCTTGCTAAACGTTACTACGATCAAGCCCTGGAAATTGATCCAGCGGCAAAATTACCTGTCACCCTGGCACTTACAAGCCTATGGTTCCGGAAGAATTATGGGAACAGTTTTCTGGTTCGCACTATTGATACTCTGCCTGAAGTTTATCCAAAAGTGGAAGCATGGGTGGAGAGTGTCATCATGGAGGAGGGAAATGCAACAATTCTTACCCTTTTTATTTGCCTTCTGACTGTCCTTTACCTTCGTGAGTGGCAACGTAGGCATGCTGTTCCTGCTCCAGCTGATGATGTCGCTGTACCACAACAGATCGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23469.p1 GENE.R_Transcript_23469~~R_Transcript_23469.p1 ORF type:complete len:679 (+),score=129.37,Sel1|PF08238.8|8.1,Sel1|PF08238.8|7.9e+03,Sel1|PF08238.8|3.1e-08,Sel1|PF08238.8|6.9e-06,Sel1|PF08238.8|4.2e-05,Sel1|PF08238.8|0.00018,Sel1|PF08238.8|4.5,Sel1|PF08238.8|44,Sel1|PF08238.8|0.45,Sel1|PF08238.8|7.5e-05,TPR_11|PF13414.2|36,TPR_11|PF13414.2|88,TPR_11|PF13414.2|75,TPR_11|PF13414.2|0.01,TPR_11|PF13414.2|67,TPR_11|PF13414.2|0.0025,TPR_11|PF13414.2|0.0087 R_Transcript_23469:173-2209(+)
MRHRRILVHKYLIILITFSLLPLHSLSRSFVLVLSQDDLRDTINPNPNSPPSEEPNSDSESSEWDEFGDADSRFEEELDPGSWRPVFEPDGNRNLEEESLYYSGVYKMISAASAGEPRLMEEAAVEIEAAAKGGDSNARSVLGFLYQMGIVRETDKAKAILYHHFAAQGGNLQSKMALAHIYARQDMHEKAVKLYSELAEVAVNSFLISKDSPVIEPVRIHVGAEENKEALRKSRGEDDEDFQILEYQAQKGNAGAMYKIGIFYYFGLRGLRRDPSKALSWFLKAVEKGEPRSMELLGEIYVRGAGVERNYTKALEWLTLAAKQHLYSAYNGIGYLYVKGYGVEKKNHTKAKEFFEKAADNEDPGGYYNLGVLYLKGIGVNKDVKLACRYFILASNAGQPKAFYQLAKMFHTGVGLKKNLHMATALYKLVAERGPWNSLSRWALEAYLKGDVGKALLLYSRMAELGYEVAQSNAAWILDKYGERSMCIGASGFCTDVERHQRAHLLWWQASEQGNEHAALLIGDAYYYGRGTDRDYERAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALEIDPAAKLPVTLALTSLWFRKNYGNSFLVRTIDTLPEVYPKVEAWVESVIMEEGNATILTLFICLLTVLYLREWQRRHAVPAPADDVAVPQQIDE*

Click here to download the sequence:
Link to NCBI Protein BLAST