Transcript Information: R_Transcript_234699.p1


Annotated TAIR IDAT5G45820.1
Annotated Gene NameCBL-interacting protein kinase 20
Annotated Gene Symbol(s)CIPK20, SnRK3.6, PKS18
Annotation TypeHomolog
Chromosome Positionchr5:18587081-18588400 | Reverse length=439
E-Value3E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9446340846078
Replicate 27.1749947465767
Replicate 37.3334519642359
Condition 2: 8 Hour
Replicate 13.2589100829067
Replicate 22.0108706691714
Replicate 34.1134944931093
Condition 3: 24 Hour
Replicate 11.5690587673611
Replicate 23.0940830817716
Replicate 31.2597240107567


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234699.p1 GENE.R_Transcript_234699~~R_Transcript_234699.p1 ORF type:internal len:278 (-),score=48.83,Pkinase|PF00069.21|4.5e-51,Pkinase_Tyr|PF07714.13|1.9e-26,NAF|PF03822.10|2.9e+03,NAF|PF03822.10|3.2e-08 R_Transcript_234699:1-831(-)
AGTTTTTCGTCGAGTTTTCCTTTTCTTCTAACTTTGGTGTACAAGTCACCACCGCCTACATACTCCATGACTAAGTATATGCTAGATTTTGTAGGAGGTGGTGACTTGTACACCAAAGTTAGAAGAAAAGGAAAACTCGACGAAAAACTGGTAAAGAAATACTTCCTACAGCTTATCAAAGCTATTGAGTATTGCCATAGTCGTGGGGTTGTTCACAGAGATCTTAAGTTAGAGAACATTTTGTTAGAAAAAAATGGTGAAACACTCAAACTTGCGGATTTTGGGTTATCAACAATCCAAGAAAATGAGCGAGGAAAAAACCCTTATGGTCTTCTTTATACGCCTTGTGGTGCAATGGCTTATATTGCTCCAGAGATTATAAAGGGTGACAAATATGATGGGAAGAAAGCTGATATTTGGTCATGTGGGGTTATACTTTACTCATTTCTTGCTGGTTTTCCACCATTCCAAGATGAAAATCGAATGAAAATGTTTTGGAAAATCAGGAGGGGTAAGTATGGTTTTCCTTCACATTTTGATGAGGAATCTAAGGATTTGATTAGAAGGATGTTGGCTACAAAACCTAGTGAAAGGATCACAATTGAGGAGATCATGAAATCATCTTGGTTACAAACTTGTGAGTATTATGAAAATGATCATGGTCAATTAGCCTCTGAATCAACTTCAGAGGATCAGGGTTTGTTCTGTTCTTCTCCTATTTCTTTCAATGCCTTTGATTTTATCTTGTCAATGGCTTCGGGTTTGGACTTGTCAAGCATGTTTGAGAGCCATGAAAGGAGCCTTGGAACGACGTTTGTGACTAAGTGTTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234699.p1 GENE.R_Transcript_234699~~R_Transcript_234699.p1 ORF type:internal len:278 (-),score=48.83,Pkinase|PF00069.21|4.5e-51,Pkinase_Tyr|PF07714.13|1.9e-26,NAF|PF03822.10|2.9e+03,NAF|PF03822.10|3.2e-08 R_Transcript_234699:1-831(-)
SFSSSFPFLLTLVYKSPPPTYSMTKYMLDFVGGGDLYTKVRRKGKLDEKLVKKYFLQLIKAIEYCHSRGVVHRDLKLENILLEKNGETLKLADFGLSTIQENERGKNPYGLLYTPCGAMAYIAPEIIKGDKYDGKKADIWSCGVILYSFLAGFPPFQDENRMKMFWKIRRGKYGFPSHFDEESKDLIRRMLATKPSERITIEEIMKSSWLQTCEYYENDHGQLASESTSEDQGLFCSSPISFNAFDFILSMASGLDLSSMFESHERSLGTTFVTKCS

Click here to download the sequence:
Link to NCBI Protein BLAST