Transcript Information: R_Transcript_234877.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeOrtholog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value2E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76928187931765
Replicate 20
Replicate 30.52659166887707
Condition 2: 8 Hour
Replicate 10.46907787255259
Replicate 20.34269550714461
Replicate 30.55637120675516
Condition 3: 24 Hour
Replicate 11.4953361029539
Replicate 20.59152035338713
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234877.p1 GENE.R_Transcript_234877~~R_Transcript_234877.p1 ORF type:complete len:261 (+),score=52.64,Spermine_synth|PF01564.13|4e-64 R_Transcript_234877:103-885(+)
ATGGTTGTGAAGACTTCAACATATGGGAAGATTGTAGTCCTAAATGGTTCACTCCAGCTAAGTGAAAAAGATGAGTGTGCCTACCAAGAGATGATTACACACCTTCCTCTTTGCTCCATTCCTAATCCAAAAAAGTTACTGGCGATTGGGGGAGGAGATGGTGGAATTTTACGGGAAGCGTCGCGCCATCCTTCTTTGGAGCAGATTGACATATGTGAACTTGACAAAATGGTCATAGATGTGTATGAAAGGTTTTTTCCTGATATATTTCTTGGCTACAAAGATCCCCGAGTAAAGTTGCACCTTGATGATGGATTTGCCTTCGTGAAATCTGTTCCTCAAGGCACTTATGATGCTGTGATATTGGATGCCTTCCATATGATGGGGCCTGCTGCGGAAGAACTTGCTGATGAGAACTTCTTGGAAGCAATAGCAACAGCGCTCCGCCCAGGAGGCGTCCTATGTGCTCCTGCAGAAAGCTTCTGGATGACCGATTTGAGAATCCAAAACATTGTCTCAAAATGTAGAAAAACTTTCAAAGGATCTGTTAACTATGCTTGGACTACAGTTCCTACTTACCAAAGTGGTGTCATCGGGTACATGCTCTGCTCAACTGAAGGGCCACCAGTGGACTTCAAGCACCCAATAAACCCTTTAGATGAAAATGCAAATACTGGGATTGCAAACACACCACTGAAGTTCTATAACTCAGAGATGCACACTGCTGCATTCAGCTTGCCCCAGTTTGCAAAGGAGAACAGAGGTTCGCTGGACAAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234877.p1 GENE.R_Transcript_234877~~R_Transcript_234877.p1 ORF type:complete len:261 (+),score=52.64,Spermine_synth|PF01564.13|4e-64 R_Transcript_234877:103-885(+)
MVVKTSTYGKIVVLNGSLQLSEKDECAYQEMITHLPLCSIPNPKKLLAIGGGDGGILREASRHPSLEQIDICELDKMVIDVYERFFPDIFLGYKDPRVKLHLDDGFAFVKSVPQGTYDAVILDAFHMMGPAAEELADENFLEAIATALRPGGVLCAPAESFWMTDLRIQNIVSKCRKTFKGSVNYAWTTVPTYQSGVIGYMLCSTEGPPVDFKHPINPLDENANTGIANTPLKFYNSEMHTAAFSLPQFAKENRGSLDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST