Transcript Information: R_Transcript_234878.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeHomolog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46210027733465
Replicate 20.53155190927337
Replicate 30.38661160499835
Condition 2: 8 Hour
Replicate 10.30994765756007
Replicate 20.47174856205033
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27918049228579
Replicate 30.3694127373316


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234878.p1 GENE.R_Transcript_234878~~R_Transcript_234878.p1 ORF type:complete len:237 (+),score=46.69,Spermine_synth|PF01564.13|3.6e-37,Spermine_synth|PF01564.13|5.3e-14 R_Transcript_234878:103-813(+)
ATGGTTGTGAAGACTTCAACATATGGGAAGATTGTAGTCCTAAATGGTTCACTCCAGCTAAGTGAAAAAGATGAGTGTGCCTACCAAGAGATGATTACACACCTTCCTCTTTGCTCCATTCCTAATCCAAAAAAGTTACTGGCGATTGGGGGAGGAGATGGTGGAATTTTACGGGAAGCGTCGCGCCATCCTTCTTTGGAGCAGATTGACATATGTGAACTTGACAAAATGGTCATAGATGTGTATGAAAGGTTTTTTCCTGATATATTTCTTGGCTACAAAGATCCCCGAGTAAAGTTGCACCTTGATGATGGGCCTGCTGCGGAAGAACTTGCTGATGAGAACTTCTTGGAAGCAATAGCAACAGCGCTCCGCCCAGGAGGCGTCCTATGTGCTCCTGCAGAAAGCTTCTGGATGACCGATTTGAGAATCCAAAACATTGTCTCAAAATGTAGAAAAACTTTCAAAGGATCTGTTAACTATGCTTGGACTACAGTTCCTACTTACCAAAGTGGTGTCATCGGGTACATGCTCTGCTCAACTGAAGGGCCACCAGTGGACTTCAAGCACCCAATAAACCCTTTAGATGAAAATGCAAATACTGGGATTGCAAACACACCACTGAAGTTCTATAACTCAGAGATGCACACTGCTGCATTCAGCTTGCCCCAGTTTGCAAAGGAGAACAGAGGTTCGCTGGACAAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234878.p1 GENE.R_Transcript_234878~~R_Transcript_234878.p1 ORF type:complete len:237 (+),score=46.69,Spermine_synth|PF01564.13|3.6e-37,Spermine_synth|PF01564.13|5.3e-14 R_Transcript_234878:103-813(+)
MVVKTSTYGKIVVLNGSLQLSEKDECAYQEMITHLPLCSIPNPKKLLAIGGGDGGILREASRHPSLEQIDICELDKMVIDVYERFFPDIFLGYKDPRVKLHLDDGPAAEELADENFLEAIATALRPGGVLCAPAESFWMTDLRIQNIVSKCRKTFKGSVNYAWTTVPTYQSGVIGYMLCSTEGPPVDFKHPINPLDENANTGIANTPLKFYNSEMHTAAFSLPQFAKENRGSLDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST