Transcript Information: R_Transcript_234918.p1


Annotated TAIR IDAT3G10650.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3325562-3330819 | Reverse length=1309
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1941189409629
Replicate 20.58868132008312
Replicate 30.8563266391085
Condition 2: 8 Hour
Replicate 12.2883985932005
Replicate 21.4628614288626
Replicate 31.3571297660102
Condition 3: 24 Hour
Replicate 12.1455894605331
Replicate 20.20612391486521
Replicate 30.20455798772801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_234918.p1 GENE.R_Transcript_234918~~R_Transcript_234918.p1 ORF type:5prime_partial len:107 (+),score=31.08 R_Transcript_234918:1-321(+)
CCCATATTAAGGAAACTAGCATGGTTTAGTTCACCTAAGATATCATCTAAGGTGGAGGAAACTAGCATGAAAAAGTTTGAGGTTTCCTCTGATGATGTGGCTACCCAAAATGGTGCTGAGGTTATAGTGCAAACTTCTCATTCATCAGAGAATGACAATGCCAAGCAAATGGACTCTGTAAAATCACAGTCACGTCTTGATCAACCACCAAAAAAGTTGGCATCTCAAATGAGTGCTCATGAGGATTTTCTTGAGCTGGATGATGATGTACATTTTTTTGGGTCTTTGCCAAGAGTATCCACCATCGACTACAGTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_234918.p1 GENE.R_Transcript_234918~~R_Transcript_234918.p1 ORF type:5prime_partial len:107 (+),score=31.08 R_Transcript_234918:1-321(+)
PILRKLAWFSSPKISSKVEETSMKKFEVSSDDVATQNGAEVIVQTSHSSENDNAKQMDSVKSQSRLDQPPKKLASQMSAHEDFLELDDDVHFFGSLPRVSTIDYSD*

Click here to download the sequence:
Link to NCBI Protein BLAST