Transcript Information: R_Transcript_235090.p1


Annotated TAIR IDAT5G66350.1
Annotated Gene NameLateral root primordium (LRP) protein-related
Annotated Gene Symbol(s)SHI
Annotation TypeOrtholog
Chromosome Positionchr5:26504714-26506143 | Reverse length=331
E-Value2.4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.092610258267281
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_235090.p1 GENE.R_Transcript_235090~~R_Transcript_235090.p1 ORF type:internal len:196 (+),score=42.11,DUF702|PF05142.8|2.5e-21,DUF702|PF05142.8|9.9e+03 R_Transcript_235090:3-587(+)
TGTGGGACACTGGAACCCTCGGCTCTTACAACAAGTCCTGCATCTTGTATGAGCACAATCTCTCTTTGCCTTGTTCCCACAGTCTTGGCAGCTCACCTTTTAGATTACCACCACCAGCACCACCTTCACCAACACCAGCAACGCCACCTTGCTCTTCCTCTTTCTCTCTCTAGAACTTCCTCTCTCCTCCTCCACCACCACAGCCCCTCTTCAGGGTTGGAAGGGGGGAATTTCCCAGTGGAGGTGAACTCCTTGGCAACATTTAGATGTATAAGAGTGAGTTCAGATGACAATGTGGTGGATCAATATGCATATCAAACCTCAATTAACATAGGGGGGCATGTTTTCAAGGGAATTCTCTATGATCAAGGTCCCATTGATGGTGCTAGCGGTGGTGGTGAGAGCTCGTCAGCCGCCACGAGCGATAACCAACAATTCCACCACCACCACCACCAGTTTGAAATCACGGCCACCAACGCCGCTAACACGGCCGCTGTTCCTCCTCCTTCAAGTGGCGGTGCAAATTTGCTTTATCCTCCTCCTCCTTCCTTGTATTCTGCTCCCTTCAATGCTTTTTTGCCTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_235090.p1 GENE.R_Transcript_235090~~R_Transcript_235090.p1 ORF type:internal len:196 (+),score=42.11,DUF702|PF05142.8|2.5e-21,DUF702|PF05142.8|9.9e+03 R_Transcript_235090:3-587(+)
CGTLEPSALTTSPASCMSTISLCLVPTVLAAHLLDYHHQHHLHQHQQRHLALPLSLSRTSSLLLHHHSPSSGLEGGNFPVEVNSLATFRCIRVSSDDNVVDQYAYQTSINIGGHVFKGILYDQGPIDGASGGGESSSAATSDNQQFHHHHHQFEITATNAANTAAVPPPSSGGANLLYPPPPSLYSAPFNAFLPG

Click here to download the sequence:
Link to NCBI Protein BLAST