Transcript Information: R_Transcript_235250.p2


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value2.7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43983038445105
Replicate 20
Replicate 30.27598479031509
Condition 2: 8 Hour
Replicate 10.29501042105115
Replicate 20.26940821495404
Replicate 30.43738820772017
Condition 3: 24 Hour
Replicate 10.55320017416154
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_235250.p2 GENE.R_Transcript_235250~~R_Transcript_235250.p2 ORF type:5prime_partial len:83 (+),score=5.48 R_Transcript_235250:1-249(+)
TATATTGATCGTATCGCTAGTTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGGTATGTAATCTTGATCTTCTTTTTTGTGAGTGCTATGACTACCACCGTCCCGCTTTTTTTCTTTTACACCAACTCAAAATTGGACGTCCTAAATTCATCTTTACATTGCTCTGGTAAAAATTTGAATTTAAAGGCAATTTCACCCTTCTTTTTCTTCTTTCCTCCTTTTGAAGATATGCCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_235250.p2 GENE.R_Transcript_235250~~R_Transcript_235250.p2 ORF type:5prime_partial len:83 (+),score=5.48 R_Transcript_235250:1-249(+)
YIDRIASSKWEVKELGMEHNGYVILIFFFVSAMTTTVPLFFFYTNSKLDVLNSSLHCSGKNLNLKAISPFFFFFPPFEDMPT*

Click here to download the sequence:
Link to NCBI Protein BLAST