Transcript Information: R_Transcript_235449.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0741828976368
Replicate 21.7681095087409
Replicate 30.96449421457484
Condition 2: 8 Hour
Replicate 11.2887297340655
Replicate 21.1768885179571
Replicate 30.57320875643327
Condition 3: 24 Hour
Replicate 11.4499667722761
Replicate 20.69648185970244
Replicate 30.9215875657641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_235449.p1 GENE.R_Transcript_235449~~R_Transcript_235449.p1 ORF type:internal len:95 (-),score=7.22,RPE65|PF03055.11|7.8e-22 R_Transcript_235449:1-282(-)
TTGGCCCACTCCTTCACAGCTCATCCAAAAGTTGACCCATTCACAGGAGAGATGTTCACTTTTGGATACTCCCACTCTCCACCATATGTTACATATAGAGTGATATCAAAGGATGGTTACATGCATGATCCAGTACCTATAACCATACCAGCACCTGTCATGATGCATGATTTCGCCATAACTGAAAATTATGCAATTTTCATGGATCTCCCATTATACTTCAGACCTAAGGTATGGCAACCCGTGAACCGGGCACAGTTGTTTAGGAACTTTATTCTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_235449.p1 GENE.R_Transcript_235449~~R_Transcript_235449.p1 ORF type:internal len:95 (-),score=7.22,RPE65|PF03055.11|7.8e-22 R_Transcript_235449:1-282(-)
LAHSFTAHPKVDPFTGEMFTFGYSHSPPYVTYRVISKDGYMHDPVPITIPAPVMMHDFAITENYAIFMDLPLYFRPKVWQPVNRAQLFRNFILF

Click here to download the sequence:
Link to NCBI Protein BLAST