Transcript Information: R_Transcript_235554.p1


Annotated TAIR IDAT5G43470.1
Annotated Gene NameDisease resistance protein (CC-NBS-LRR class) family
Annotated Gene Symbol(s)RPP8, HRT, RCY1
Annotation TypeHomolog
Chromosome Positionchr5:17463130-17466658 | Reverse length=908
E-Value6E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2393985833451
Replicate 20.72579803908191
Replicate 31.0746370724121
Condition 2: 8 Hour
Replicate 10.99757227562851
Replicate 21.1318471055415
Replicate 31.299744958003
Condition 3: 24 Hour
Replicate 11.5021775099609
Replicate 21.0619198725093
Replicate 31.675355173565


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_235554.p1 GENE.R_Transcript_235554~~R_Transcript_235554.p1 ORF type:complete len:810 (+),score=145.64,NB-ARC|PF00931.18|1.9e-42 R_Transcript_235554:406-2835(+)
ATGGCTAACAAGGATGCTTCCTTGGCTGTAGACAATACCATTCAGCACCTGGAACAAGAGGCTGAGACACTTCAAGAGGTGCATAAACTGAAACCCCTTCAGTCGGGGCTCAGGAATATGAGCCTGTCACTTAGGGACTTTGATGGTCAGGAAGAGAGTCATCCAGAAACAGCTAAATGGTTTCGCCAAGTCAGAGACACTGCTTATGAGGCACATAATGCTGTTGATTCTCTTGTGGTCGTCTGCAAGTTGCAGAAGCATAAGAATAAGTTTAAAAGGTTGCTTTCCGGAAAAAGATCCATCAAACAATGCATCCAAGAGATTGATGGTGTTGCAAAGCGTATCCAGAAAATTCCATCCTCCAAGAACTATGTTAGAACCAATCCTGTGTTAGATGATACAGTGGGATTTGAAGAAATCAGAGACGCTCTGGTCAGCCAGCTTACTAGGGGGGGATTACAGCGCGATGTCGTATTGATCTATGGAGAGAAAGGCTTGGGCAAAACAACTCTTGCCAAGATGGTTTACAATGACGCTACAGTTAACCATCAGTTTCCCCGCAGAGAGTGGGTGAATGTGCCACAGGACTTCCCACTGGGAAACTCATTGTGGAGAATTTTCATTCAGATCATGCCATCAAGTTCAGAGACTGAACGCAATATGAATGAGGCCGCCTTGAAGGCAAAGCTCGTTGAAAGCATGAAAGGCAACAAGTATCTCATTGTGATGGACAACATGTCTGAAAGCAAGGGACATGATGCACTTATATCCTTATTTCCAGATGAATCAAATGGAAGTCGGATATTGTTAACAAGCACACTTACACCGGAGGTATTGCATGTCAAAAGAAGTCTTTCACATGAGATGATTCCTCTGGACATTAGCAAGAGCTGGGAGCTTTTGTCAAAGAAAGTATTTGGCGGGGCAAATTTAGTCCTGGAGGACCTTGGGAAAAAAATGGTGAAAATATGTAACGGCTCTCCAAAGGCGATTGTGTCTCTGGCAGCAACCTTGAATCAAACAAAGAAAACAGAAGAAATGTGGTCGAAATTTCTTGAAGATCTAGCTCATGGGGTCAACCTTGCCAGCTATCTGGACCTTCCTGCCAAAGGAGGACTAGAGAGATGCCTATTGTACTTCAGTATGTCATGTGATGATTTGAATATACGTGCGAAGAAAATGATCCAAATGTGGGCAGCTGAAGGGCTTCTGAATCGAAAGAGCAGTGAAAGACCAGAAGAAATTGGGGAAGACTACTTGAAGAAACTCATCAATAGTTGCTTCATCGAAGTAGTTGGTGCAGAAAGCCGAGATGGACACATGAAAACATGCCGTGTCAACACTGCAGTTTGGATTCAAAACTATGTCAACAATCTTACGAAATCTGATGATGGAGTCCACAAGTTTTTGGGCGATAAAACAGACAACACTCCCATTGAAAAGGGCATAAGATGGTTGGGAATCCATAATGACTCATTCATGGCCATTTTAAAAAGGTTTCAGGATGGCTCGCGTGTCAGTTCTCTTCATTGCTTTGGTAAGAATAATAAACCTATATCATCTGCGGCCCTTTGGGCAGCTTTACACCATAAGTTTCCCAATCTTAAGGTGTTAAATTTGGAGTCTCTAGTGCTGGAAAATGTGCCCAAACATCTAGGAAAACTTGTTCATTTAAGGTATTTGAGGTTGCGAGCTCCCAGTGTCGCACATCTTCCTACTTGTGTTAGTAGCCTTTCCTTTTTGGAGACACTAGACATGAGGGAATCTCGTTTACACAGCATGCCTCCTGAAATATGGAAGATGGAGCGTCTCCGCCATATTTATCTTGGTGGCTTCACAATGCCAGACGCTAGAGGCTTATACTACTACAAAAACCTGTGGAACCTCCAAAGTCTTTCAGGGGTGCACCCTGACAAGGTTTTGAAGAGGCTAATGGTGAAAGCCAAGTTCCCTAATGTCACCAAATTGAGAATATGCACTAAGGAAACAAAAGTGGCAACCCAATTTCTCAATAGCATTGACCACTTGTACCATCTTCAATCCCTAAGGGTGGAGAATCCCACCAAACTTCCAGATCCAAATGCGTTTCCCCTGAGCCTAACAAAGCTGACCCTCCTTGAGACCAAACTCCAGCCACAGTGTATGAAGACAGTAGAAAAGCTCCCAAACCTAAGGAAACTAAAATTATTGAAGGATTCCATCAGTGGAAAAGAGATTGTGTGTGATGCAGGCGGATTTCCACAACTCCAAGTTTTGTTCTTGATAAATTTGGTTCTGGAGAAGCTGACACGGGGTAAAGGGGCTATGCGATATCTCAAGCATTTGTTCATCAGTGAATCTGTAAACAAGGAGAAACTTCCAGATGATTTAAGGCAGATGGCTAAGGAAGTGCAACCGGATGAGAGTTGTTTGAAGGCAACTTCAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_235554.p1 GENE.R_Transcript_235554~~R_Transcript_235554.p1 ORF type:complete len:810 (+),score=145.64,NB-ARC|PF00931.18|1.9e-42 R_Transcript_235554:406-2835(+)
MANKDASLAVDNTIQHLEQEAETLQEVHKLKPLQSGLRNMSLSLRDFDGQEESHPETAKWFRQVRDTAYEAHNAVDSLVVVCKLQKHKNKFKRLLSGKRSIKQCIQEIDGVAKRIQKIPSSKNYVRTNPVLDDTVGFEEIRDALVSQLTRGGLQRDVVLIYGEKGLGKTTLAKMVYNDATVNHQFPRREWVNVPQDFPLGNSLWRIFIQIMPSSSETERNMNEAALKAKLVESMKGNKYLIVMDNMSESKGHDALISLFPDESNGSRILLTSTLTPEVLHVKRSLSHEMIPLDISKSWELLSKKVFGGANLVLEDLGKKMVKICNGSPKAIVSLAATLNQTKKTEEMWSKFLEDLAHGVNLASYLDLPAKGGLERCLLYFSMSCDDLNIRAKKMIQMWAAEGLLNRKSSERPEEIGEDYLKKLINSCFIEVVGAESRDGHMKTCRVNTAVWIQNYVNNLTKSDDGVHKFLGDKTDNTPIEKGIRWLGIHNDSFMAILKRFQDGSRVSSLHCFGKNNKPISSAALWAALHHKFPNLKVLNLESLVLENVPKHLGKLVHLRYLRLRAPSVAHLPTCVSSLSFLETLDMRESRLHSMPPEIWKMERLRHIYLGGFTMPDARGLYYYKNLWNLQSLSGVHPDKVLKRLMVKAKFPNVTKLRICTKETKVATQFLNSIDHLYHLQSLRVENPTKLPDPNAFPLSLTKLTLLETKLQPQCMKTVEKLPNLRKLKLLKDSISGKEIVCDAGGFPQLQVLFLINLVLEKLTRGKGAMRYLKHLFISESVNKEKLPDDLRQMAKEVQPDESCLKATSK*

Click here to download the sequence:
Link to NCBI Protein BLAST